The human genome browser at UCSC.
paper
Cited
Public
Unavailable
- Authors
- Kent, W James; Sugnet, Charles W; Furey, Terrence S; Roskin, Krishna M; Pringle, Tom H; Zahler, Alan M; Haussler, David
- Year
- 2002
- Journal
- Genome research
- PMID
- 12045153
- DOI
- 10.1101/gr.229102
- PMCID
- PMC186604
As vertebrate genome sequences near completion and research refocuses to their analysis, the issue of effective genome annotation display becomes critical. A mature web tool for rapid and reliable display of any requested portion of the genome at any scale, together with several dozen aligned annotation tracks, is provided at http://genome.ucsc.edu. This browser displays assembly contigs and gaps, mRNA and expressed sequence tag alignments, multiple gene predictions, cross-species homologies, single nucleotide polymorphisms, sequence-tagged sites, radiation hybrid data, transposon repeats, and more as a stack of coregistered tracks. Text and sequence-based searches provide quick and precise access to any region of specific interest. Secondary links from individual features lead to sequence details and supplementary off-site databases. One-half of the annotation tracks are computed at the University of California, Santa Cruz from publicly available sequence data; collaborators worldwide provide the rest. Users can stably add their own custom tracks to the browser for educational or research purposes. The conceptual and technical framework of the browser, its underlying MYSQL database, and overall use are described. The web site currently serves over 50,000 pages per day to over 3000 different users.
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|---|---|---|---|---|
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| DNA methylation shapes the Polycomb landscape during the exit from naive pluripotency. | Richard Albert J et al. | β | 2025 | β |
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| Downregulation of miRNA-133a and miRNA-452 associated with upregulation of CLNK and LEF1 genes in chronic lymphocytic leukemia: in vitro and in silico insights. | Dalyan A et al. | β | 2025 | β |
| Dual transcriptional activities of PAX3 and PAX7 spatially encode spinal cell fates through distinct gene networks. | Rondon R et al. | β | 2025 | β |
| DuplexDiscoverer: a computational method for the analysis of experimental duplex RNA-RNA interaction data. | Semenchenko E et al. | β | 2025 | β |
| E2F7 promotes ESCC progression and cisplatin resistance through transcriptional activation of DVL3 and the Wnt signaling pathway. | Li X et al. | β | 2025 | β |
| Easy triplex: An online tool for predicting the formation of DNA-RNA triple helices. | Xian L et al. | β | 2025 | β |
| Effects of BPAF exposure on endometrial remodeling: A focus on the homeostasis of the extracellular matrix and the immune status. | Ji X et al. | β | 2025 | β |
| Engineered CRISPR-Cas12a for higher-order combinatorial chromatin perturbations. | Hsiung CC et al. | β | 2025 | β |
| Enhancer of TRPS1 rs12549956 Influences Hair Thickness in Chinese Populations. | Qian Q et al. | β | 2025 | β |
| Enhancing R-loop prediction with high-throughput sequencing data. | Vanhaeren T et al. | β | 2025 | β |
| Enhancing the neural differentiation capabilities of genetically asymmetric mouse F1 hybrid embryonic stem cell lines. | Saito A et al. | β | 2025 | β |
| Enkephalin-producing regulatory T cells in the skin restrain local inflammation through control of nociception. | Mendoza A et al. | β | 2025 | β |
| Epigenetic biomarkers of socioeconomic status are associated with age-related chronic diseases and mortality in older adults. | Schmitz LL et al. | β | 2025 | β |
| Epigenetic deprogramming by disruption of CIZ1-RNA nuclear assemblies in early-stage breast cancers. | Turvey GL et al. | β | 2025 | β |
| Epigenetic regulation of the respiratory chain by a mitochondrial distress-related redox signal. | Baeken MW et al. | β | 2025 | β |
| Error-corrected flow-based sequencing at whole-genome scale and its application to circulating cell-free DNA profiling. | Cheng AP et al. | β | 2025 | β |
| Estimating the size of long tandem repeat expansions from short reads with ScatTR. | Al-Abri R et al. | β | 2025 | β |
| EWS::FLI1-DHX9 interaction promotes Ewing sarcoma sensitivity to DNA topoisomerase 1 poisons by altering R-loop metabolism. | Olmedo-Pelayo J et al. | β | 2025 | β |
| Exact model-free function inference using uniform marginal counts for null population. | Li Y et al. | β | 2025 | β |
| Exome and Genome Sequencing Reveals Novel Variants for Severe Diabetic Retinopathy in Type 1 Diabetes. | Vuori N et al. | β | 2025 | β |
| Exploring MAPK and mTOR Pathways in Feline Thyroid Tumors. | Monteiro A et al. | β | 2025 | β |
| Exploring the size limits of Bionano optical genome mapping to resolve alternative structures of linked interspersed chromosomal duplications. | Pei Y et al. | β | 2025 | β |
| Female germline expression of OVO transcription factor bridges Drosophila generations. | Benner L et al. | β | 2025 | β |
| FGFR2 Abrogation Intercepts Pancreatic Ductal Adenocarcinoma Development. | Tonelli C et al. | β | 2025 | β |
| Four Pharmacogenomic Variants Strongly Linked to Corticosteroid-Induced Avascular Necrosis in Children with Cancer. | Cordova-Delgado M et al. | β | 2025 | β |
| FoxO1-zDHHC4-CD36 S-Acylation Axis Drives Metabolic Dysfunction in Diabetes. | Dennis KMJH et al. | β | 2025 | β |
| FOXP4 Variants Are Associated With Plateau Iris and Angle Closure Glaucoma. | Presley W et al. | β | 2025 | β |
| From Gene to Whole Cell: Modeling, Visualization, and Analysis. | Sommer B et al. | β | 2025 | β |
| Full-length mRNA sequencing resolves novel variation in 5' UTR length for genes expressed during human CD4 T-cell activation. | Woolley CR et al. | β | 2025 | β |
| Functional analysis of cancer-associated germline risk variants. | Kellman LN et al. | β | 2025 | β |
| Functional and Regulatory Effects of Factor V Leiden and Factor V rs6028 in Breast Cancer. | Lind SM et al. | β | 2025 | β |
| Functional Characterization of LTR12C as Regulators of Germ-Cell-Associated TA-p63 in U87-MG and T98-G In Vitro Models. | Meola L et al. | β | 2025 | β |
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| Functional synapses between neurons and small cell lung cancer. | Sakthivelu V et al. | β | 2025 | β |
| Gene model for the ortholog of <i>eIF4E1</i> in <i>Drosophila ananassae</i>. | Chamberlain M et al. | β | 2025 | β |
| Gene model for the ortholog of <i>eIF4E1</i> in <i>Drosophila yakuba</i>. | Lose B et al. | β | 2025 | β |
| Gene model for the ortholog of <i>Glys</i> in <i>Drosophila simulans</i>. | Gruys ML et al. | β | 2025 | β |
| Gene model for the ortholog of <i>dock</i> in <i>Drosophila ananassae</i>. | Backlund AE et al. | β | 2025 | β |
| Gene model for the ortholog of <i>dock</i> in <i>Drosophila eugracilis</i>. | Bicanovsky GN et al. | β | 2025 | β |
| Gene model for the ortholog of <i>gig</i> in <i>Drosophila mojavensis</i>. | Gruys ML et al. | β | 2025 | β |
| Gene model for the ortholog of <i>Glys</i> in <i>Drosophila busckii</i>. | Backlund AE et al. | β | 2025 | β |
| Gene model for the ortholog of <i>Ilp3</i> in <i>Drosophila ananassae</i>. | Gruys ML et al. | β | 2025 | β |
| Gene model for the ortholog of <i>lin-28</i> in <i>Drosophila mojavensis</i>. | Lawson ME et al. | β | 2025 | β |
| Gene model for the ortholog of <i>lin-28</i> in <i>Drosophila simulans</i>. | Lawson ME et al. | β | 2025 | β |
| Gene model for the ortholog of <i>Mipp2</i> in <i>Drosophila simulans</i>. | Jones GM et al. | β | 2025 | β |
| Gene model for the ortholog of <i>mts</i> in <i>Drosophila mojavensis</i>. | Lawson ME et al. | β | 2025 | β |
| Gene model for the ortholog of <i>Pdk1</i> in <i>Drosophila grimshawi</i>. | Lawson ME et al. | β | 2025 | β |
| Gene model for the ortholog of <i>Pten</i> in <i>Drosophila ananassae</i>. | Jones GM et al. | β | 2025 | β |
| Gene model for the ortholog of <i>rictor</i> in <i>Drosophila ananassae</i>. | Backlund AE et al. | β | 2025 | β |
| Gene model for the ortholog of <i>Roc1a</i> in <i>Drosophila ananassae</i>. | Lawson ME et al. | β | 2025 | β |
| Gene model for the ortholog of <i>Roc1a</i> in <i>Drosophila eugracilis</i>. | Lawson ME et al. | β | 2025 | β |
| Gene model for the ortholog of <i>Roc1a</i> in <i>Drosophila mojavensis</i>. | Lawson ME et al. | β | 2025 | β |
| Gene model for the ortholog of <i>Roc1a</i> in <i>Drosophila persimilis</i>. | Lawson ME et al. | β | 2025 | β |
| Gene model for the ortholog of <i>Roc1a</i> in <i>Drosophila simulans</i>. | Lawson ME et al. | β | 2025 | β |
| Gene model for the ortholog of <i>S6k</i> in <i>Drosophila ananassae</i>. | Backlund AE et al. | β | 2025 | β |
| Gene model for the ortholog of <i>Sdr</i> in <i>Drosophila ananassae</i>. | Gruys ML et al. | β | 2025 | β |
| Gene model for the ortholog of <i>Sik3</i> in <i>Drosophila mojavensis</i>. | Bicanovsky GN et al. | β | 2025 | β |
| Gene model for the ortholog of <i>tgo</i> in <i>Drosophila mojavensis</i>. | Lawson ME et al. | β | 2025 | β |
| Gene model for the ortholog of <i>wrd</i> in <i>Drosophila ananassae</i>. | Lawson ME et al. | β | 2025 | β |
| Generation of Insulin-Producing Alpha TC1-6 Cells Using EpiCRISPR System for Targeted DNA Methylation. | ΔorΔeviΔ MB et al. | β | 2025 | β |
| Genetic analyses across cardiovascular traits: leveraging genetic correlations to empower locus discovery and prediction in common cardiovascular diseases. | JordΓ P et al. | β | 2025 | β |
| Genetic Analysis of Choroideremia-Related Rab Escort Proteins. | Xing Z et al. | β | 2025 | β |
| Genetic and molecular landscape of comorbidities in people living with HIV. | Botey-Bataller J et al. | β | 2025 | β |
| Genetic Causal Relationship Between Systemic Lupus Erythematosus and Malignant Tumors of the Female Reproductive System: A GWAS Analysis in European Populations. | Li J et al. | β | 2025 | β |
| Genetic Contribution to Treatment-Related Dyslipidemia in Adult Survivors of Childhood Cancer: Findings from the CCSS, SJLIFE, and DCCSS-LATER Cohorts. | Bolier M et al. | β | 2025 | β |
| Genetic Markers of Postmortem Brain Iron. | Cornelis MC et al. | β | 2025 | β |
| Genetic suppression features ABHD18 as a Barth syndrome therapeutic target. | Masud SN et al. | β | 2025 | β |
| Genetic variants in GRIN2B and NTRK2 on the etiology and treatment response to valproate and lithium in patients with bipolar disorder. | Camarena B et al. | β | 2025 | β |
| Genetic variation in the activity of a TREM2-p53 signaling axis determines oxygen-induced lung injury. | Abe Y et al. | β | 2025 | β |
| Genome-wide association meta-analysis of age at onset of walking in over 70,000 infants of European ancestry. | Gui A et al. | β | 2025 | β |
| Genome-wide association study and fine-mapping using imputed sequences to prioritize candidate genes for 30 complex traits in 50,309 Holstein bulls. | Wang J et al. | β | 2025 | β |
| Genome-Wide Association Study Identifies Candidate Genes for Body Size Traits in Wanyue Black Pigs. | Ye H et al. | β | 2025 | β |
| Genome-wide association study of rice vegetative growth under ammonium or nitrate nutrition. | Kasemsap P et al. | β | 2025 | β |
| Genome-wide CRISPR guide RNA design and specificity analysis withΒ GuideScan2. | Schmidt H et al. | β | 2025 | β |
| Genomic Anomaly Detection with Functional Data Analysis. | Kanjilal R et al. | β | 2025 | β |
| Genomic clustering tendency of transcription factors reflects phase-separated transcriptional condensates at super-enhancers. | Wang S et al. | β | 2025 | β |
| Genomic landscape of endometrial polyps. | Reinikka S et al. | β | 2025 | β |
| Genomic signatures of subterranean lifestyle and ecological adaptation in Myospalax. | Wan N et al. | β | 2025 | β |
| Genotypic and Phenotypic Characterization of <i>Hexokinase 1</i> p.Glu847Lys Variant Causing Autosomal Dominant Pericentral Retinitis Pigmentosa. | Fan KC et al. | β | 2025 | β |
| Geometric Diagrams of Genomes: constructing a visual grammar for 3D genomics. | Molins-Pitarch C et al. | β | 2025 | β |
| Gut microbiome impact on childhood allergic rhinitis and house dust mite IgE responses. | Li J et al. | β | 2025 | β |
| High resolution of full-length RNA sequencing deciphers massive transcriptome complexity during zebrafish embryogenesis. | Bo J et al. | β | 2025 | β |
| High-throughput microRNA sequencing in the developing branchial arches suggests miR-92b-3p regulation of a cardiovascular gene network. | Goldsworthy S et al. | β | 2025 | β |
| Hillclimb-Causal Inference: a data-driven approach to identify causal pathways among parental behaviors, genetic risk, and externalizing behaviors in children. | Wei M et al. | β | 2025 | β |
| H<sup>3</sup>NGST: a fully automated, web-based platform for end-to-end ChIP-seq analysis. | Heo HH et al. | β | 2025 | β |
| Homo Sapiens Chromosomal Location Ontology: A Framework for Genomic Data in Biomedical Knowledge Graphs. | Mohseni Ahooyi T et al. | β | 2025 | β |
| Human CLOCK enhances neocortical function. | Liu Y et al. | β | 2025 | β |
| Human cytomegalovirus infection coopts chromatin organization to diminish TEAD1 transcription factor activity. | Sayeed K et al. | β | 2025 | β |
| Human de novo mutation rates from a four-generation pedigree reference. | Porubsky D et al. | β | 2025 | β |
| Human long noncoding RNA <i>VILMIR</i> is induced by major respiratory viral infections and modulates the host interferon response. | John K et al. | β | 2025 | β |
| Hypoxia induced cellular and exosomal RPPH1 promotes breast cancer angiogenesis and metastasis through stabilizing the IGF2BP2/FGFR2 axis. | Ning W et al. | β | 2025 | β |
| ID3 promotes erythroid differentiation and is repressed by a TAL1-PRMT6 complex. | Heller V et al. | β | 2025 | β |
| Identification and Functional Assessment of Candidate Causal <i>Cis</i>-Regulatory Variants Underlying Electrocardiographic QT Interval GWAS Loci. | Kadagandla S et al. | β | 2025 | β |
| Identification of 16 novel Alzheimer's disease loci using multi-ancestry meta-analyses. | Willett JDS et al. | β | 2025 | β |
| Identification of the EBF1/ETS2/KLF2-miR-126-Gene Feed-Forward Loop in Breast Carcinogenesis and Stemness. | Gambacurta A et al. | β | 2025 | β |
| Identifying colorectal cancer-specific vulnerabilities in the Wnt-driven long non-coding transcriptome. | Schwarzmueller LJ et al. | β | 2025 | β |
| Identifying Genetic Variants in Patients With Cefaclor-Induced Anaphylaxis Using Human Leukocyte Antigen Typing and Whole-Exome Sequencing. | Kim SR et al. | β | 2025 | β |
| iModEst: disentangling -omic impacts on gene expression variation across genes and tissues. | Sokolowski DJ et al. | β | 2025 | β |
| Inhibiting EZH2 complements steroid effects in Duchenne muscular dystrophy. | Jeon EY et al. | β | 2025 | β |
| Inhibitor of DNA binding-1 is a key regulator of cancer cell vasculogenic mimicry. | Thompson EJ et al. | β | 2025 | β |
| Insertional diversification of the immunoglobulin heavy chain in chronic lymphoproliferative disorders. | Fisher A et al. | β | 2025 | β |
| Insufficient gene expression and lost gene regulatory network may underlie the mechanism of Hirschsprung Disease in 5p-syndrome. | Luan Y et al. | β | 2025 | β |
| Integration of exosome-related genes and differential expression analysis reveals potential biomarkers for prostate cancer. | Huang S et al. | β | 2025 | β |
| Integration of HiMoRNA and RNAChrom: Validation of the Functional Role of Long Non-coding RNAs in the Epigenetic Regulation of Human Genes Using RNA-Chromatin Interactome Data. | Ilnitskiy IS et al. | β | 2025 | β |
| Integrative multi-omics framework for causal gene discovery in Long COVID. | Pinero S et al. | β | 2025 | β |
| Interleukin-13 gene polymorphisms and asthma susceptibility in children: a meta-analysis. | Su S et al. | β | 2025 | β |
| In utero rescue of neurological dysfunction in a mouse model of Wiedemann-Steiner syndrome. | Reynisdottir T et al. | β | 2025 | β |
| In Vitro Evaluation of the Impact of Oxygen Concentrations on Thrombomodulin Expression in a First-Trimester Trophoblast Cell Line. | Cardona P et al. | β | 2025 | β |
| Isolation and Characterization of the Adamantinomatous Craniopharyngioma Primary Cells with Cancer-Associated Fibroblast Features. | Chen D et al. | β | 2025 | β |
| JOB: Japan Omics Browser provides integrative visualization of multi-omics data. | Takahashi Y et al. | β | 2025 | β |
| kallisto, bustools and kb-python for quantifying bulk, single-cell and single-nucleus RNA-seq. | Sullivan DK et al. | β | 2025 | β |
| KLF5 enables dichotomous lineage programs in pancreatic cancer via the AAA+ ATPase coactivators RUVBL1 and RUVBL2. | Cunniff PJ et al. | β | 2025 | β |
| K-mer-based Approaches to Bridging Pangenomics and Population Genetics. | Roberts MD et al. | β | 2025 | β |
| Landscape of the Epstein-Barr virus-host chromatin interactome and gene regulation. | Tian SZ et al. | β | 2025 | β |
| Large-scale RNA-Seq mining reveals ciclopirox olamine induces TDP-43 cryptic exons. | Sinha IR et al. | β | 2025 | β |
| Lestaurtinib's antineoplastic activity converges on JAK/STAT signaling to inhibit treatment naΓ―ve and therapy resistant forms ovarian cancer. | Rodman EPB et al. | β | 2025 | β |
| Lineage trajectories and fate determinants of postnatal neural stem cells and ependymal cells in the developing ventricular zone. | Zheng J et al. | β | 2025 | β |
| Long Noncoding RNA CCDC26 Interacts With Vimentin, HNRNPC, CBX1, and CBX5 Proteins in Multiple Intracellular Compartments of Myeloid Leukemia Cells. | Tanaka Y et al. | β | 2025 | β |
| Long-range regulation of transcription scales with genomic distance in a gene-specific manner. | Jensen CL et al. | β | 2025 | β |
| Long-read genome and RNA sequencing resolve a pathogenic intronic germline LINE-1 insertion in APC. | Baumann AA et al. | β | 2025 | β |
| Long-read sequencing of 945 Han individuals identifies structural variants associated with phenotypic diversity and disease susceptibility. | Gong J et al. | β | 2025 | β |
| Long-read sequencing reveals genomic and epigenomic variation in the dark genome of human Alzheimer's disease. | Ramirez P et al. | β | 2025 | β |
| Loss of ANK3 Function Causes a Recessive Neurodevelopmental Disorder with Cerebellar Ataxia. | Maroofian R et al. | β | 2025 | β |
| <i>BDNF</i> Val66Met Genotype, DNA Methylation, mRNA, and Protein Levels as Potential Blood-Based Biomarkers for Dementia and Cognitive Decline. | Tudor L et al. | β | 2025 | β |
| <i>p21</i> Promoter Methylation Is Vital for the Anticancer Activity of Withaferin A. | Brane A et al. | β | 2025 | β |
| Lysosomal dysfunction and inflammatory sterol metabolism in pulmonary arterial hypertension. | Harvey LD et al. | β | 2025 | β |
| Major waves of H2A.Z incorporation during mouse oogenesis and preimplantation embryo development. | Fosslie M et al. | β | 2025 | β |
| Mapping chromatin interactions at melanoma susceptibility loci uncovers distant cis-regulatory gene targets. | Thakur R et al. | β | 2025 | β |
| Mapping MAVE data for use in human genomics applications. | Arbesfeld JA et al. | β | 2025 | β |
| Massively parallel characterization of transcriptional regulatory elements. | Agarwal V et al. | β | 2025 | β |
| MaxComp: Predicting single-cell chromatin compartments from 3D chromosome structures. | Zhan Y et al. | β | 2025 | β |
| Mechanism of cytarabine-induced neurotoxicity. | Liu JC et al. | β | 2025 | β |
| Mechanism of EHMT2-mediated genomic imprinting associated with Prader-Willi syndrome. | Wang SE et al. | β | 2025 | β |
| Mechanism of expression regulation of head-to-head overlapping protein-coding genes INO80E and HIRIP3. | Ryczek N et al. | β | 2025 | β |
| Mechanistic insights into 16p13.3 microdeletions encompassing TBC1D24 and ATP6V0C through advanced sequencing approaches. | Mazel B et al. | β | 2025 | β |
| Meta-analysis and review of in silico methods in drug discovery - part 1: technological evolution and trends from big data to chemical space. | Uzundurukan A et al. | β | 2025 | β |
| Meta-analysis of genome-wide associations and polygenic risk prediction for atrial fibrillation in more than 180,000 cases. | Roselli C et al. | β | 2025 | β |
| Metabolomic Signatures of Prediabetes in Mexican Americans: The Role of Genetics and Macronutrients. | Chung S et al. | β | 2025 | β |
| Methylation patterns of the nasal epigenome of hospitalized SARS-CoV-2 positive patients reveal insights into molecular mechanisms of COVID-19. | Spector BL et al. | β | 2025 | β |
| Methylation profile of individuals with sickle cell trait. | Vasconcelos AG et al. | β | 2025 | β |
| miR-660: A novel regulator in human cancer pathogenesis and therapeutic implications. | Wang Z et al. | β | 2025 | β |
| MLL4 regulates postnatal palate growth and midpalatal suture development. | Lee JM et al. | β | 2025 | β |
| Molecular Implications of <i>ADIPOQ, GAS5, GATA4</i>, and <i>YAP1</i> Methylation in Triple-Negative Breast Cancer Prognosis. | Wichtowski M et al. | β | 2025 | β |
| Multi-ancestry whole genome sequencing analysis of lean body mass. | Zhang X et al. | β | 2025 | β |
| Multidimensional analysis suggests that ZNF433 is a promising biomarker for the diagnosis and prognosis of human cancers. | Xie L et al. | β | 2025 | β |
| Multifaceted regulation of the HOX cluster and its implications in oral cancer. | Padam KSR et al. | β | 2025 | β |
| Multi-Modal Profiling Reveals Contrasting Immunomodulatory Effects of Recreational Marijuana Used Alone or with Tobacco in Youth with HIV. | Borkar SA et al. | β | 2025 | β |
| Multiple Retrotransposon-mediated NF-YA Gene Duplication Events Recurred in Diverse Groups of Mammals at Different Ancestry Levels. | Gallo A et al. | β | 2025 | β |
| Multiplex imaging reveals novel patterns of MRTFA/B activation inΒ the breast cancer microenvironment. | Wilk SM et al. | β | 2025 | β |
| Multiscale footprints reveal the organization of cis-regulatory elements. | Hu Y et al. | β | 2025 | β |
| Mutant p53 exploits enhancers to elevate immunosuppressive chemokine expression and impair immune checkpoint inhibitors in pancreatic cancer. | Mahat DB et al. | β | 2025 | β |
| Mutation screening of the ASPM gene in multiple Pashtun origin MCPH families revealed the recurrent nonsense mutation p.Trp1326*: A step towards the development of a genetic diagnostic test. | Hashmi HB et al. | β | 2025 | β |
| MyoD is essential in rhabdomyosarcoma by promoting survival through differentiation and CYLD. | Oles AR et al. | β | 2025 | β |
| Nanopore sequencing-derived methylation biomarker prediction for methylation-specific PCR in patients with head and neck squamous cell carcinoma. | Meyer D et al. | β | 2025 | β |
| Neuron-specific homologous coding genes and non-coding regulatory regions are the most conserved amongst amniotes despite neuron-specific cell size diversity. | Xu L et al. | β | 2025 | β |
| Noncoding variants and sulcal patterns in congenital heart disease: Machine learning to predict functional impact. | Mondragon-Estrada E et al. | β | 2025 | β |
| Novel photoreceptor-specific promoters for gene therapy in mid- to late-stage retinal degeneration. | Sudharsan R et al. | β | 2025 | β |
| ntSynt: multi-genome synteny detection using minimizer graph mappings. | Coombe L et al. | β | 2025 | β |
| Nucleosome wrapping energy in CpG islands and the role of epigenetic base modifications. | GiniΕ«naitΔ R et al. | β | 2025 | β |
| Optimised dissociation and multimodal profiling of prostate cancer stroma reveal fibromuscular cell heterogeneity with clinical correlates. | Damisch E et al. | β | 2025 | β |
| Pan-Cancer Analysis of G Protein-Coupled Receptors as Cancer Driver Genes and Drug Repurposing Targets. | Hou Y et al. | β | 2025 | β |
| Paracentric inversion disrupting the SHANK2 gene. | Huyghebaert J et al. | β | 2025 | β |
| Particle uptake by macrophages triggers bifurcated transcriptional pathways that differentially regulate inflammation and lysosomal gene expression. | Cobo I et al. | β | 2025 | β |
| Phasing millions of samples achieves near perfect accuracy, enabling parent-of-origin analyses. | Williams CM et al. | β | 2025 | β |
| Pleiotropic Effects of an eQTL in the CELSR2/PSRC1/SORT1 Cluster That Associates With LDL-C and Resting Metabolic Rate. | Bandesh K et al. | β | 2025 | β |
| PLiCat: decoding protein-lipid interactions by large language model. | Dong F et al. | β | 2025 | β |
| Population Genomics of Giant Mice from the Faroe Islands: Hybridization, Colonization, and a Novel Challenge to Identifying Genomic Targets of Selection. | Payseur BA et al. | β | 2025 | β |
| Potentially causal associations between placental DNA methylation and schizophrenia and other neuropsychiatric disorders. | Cilleros-Portet A et al. | β | 2025 | β |
| Prioritizing genomic variants pathogenicity via DNA, RNA, and protein-level features based on extreme gradient boosting. | Ding M et al. | β | 2025 | β |
| Probabilistic and machine-learning methods for predicting local rates of transcription elongation from nascent RNA sequencing data. | Liu L et al. | β | 2025 | β |
| Procollagen IIA mediates positive feedback control of the mouse cardiogenic transcriptional network. | Leung AW et al. | β | 2025 | β |
| Profiling the cell-specific small non-coding RNA transcriptome of the human placenta. | Telkar N et al. | β | 2025 | β |
| PRP: pathogenic risk prediction for rare nonsynonymous single nucleotide variants. | Heo JY et al. | β | 2025 | β |
| Rapid change in red cell blood group systems after the main Out of Africa of Homo sapiens. | MaziΓ¨res S et al. | β | 2025 | β |
| Rapid degradation of histone deacetylase 1 (HDAC1) reveals essential roles in both gene repression and active transcription. | English DM et al. | β | 2025 | β |
| Rapid promoter evolution of male accessory gland genes is accompanied by divergent expression in closely related Drosophila species. | McQuarrie DWJ et al. | β | 2025 | β |
| Rapid, Reliable, and Interpretable Copy Number Variant Curation Visualizations for Diagnostic Settings with SeeNV. | Bradshaw MS et al. | β | 2025 | β |
| Rare and common variants in ERAP1 and ERAP2 selected for in response to Yersinia pestis infection contribute to autoimmune disease including inflammatory bowel disease. | Win LK et al. | β | 2025 | β |
| RBPsuite 2.0: an updated RNA-protein binding site prediction suite with high coverage on species and proteins based on deep learning. | Pan X et al. | β | 2025 | β |
| Reconstruction of Segmental Duplication Rates and Associated Genomic Features by Network Analysis. | Abdullaev ET et al. | β | 2025 | β |
| Replication-associated mechanisms contribute to an increased CpGβ>βTpG mutation burden in mismatch repair-deficient cancers. | Ward JC et al. | β | 2025 | β |
| Retrotrans-genomics identifies aberrant THE1B endogenous retrovirus fusion transcripts in the pathogenesis of sarcoidosis. | Funaguma S et al. | β | 2025 | β |
| Review of the geometrical developments in GEANT4-DNA: From a biological perspective. | Khanna R et al. | β | 2025 | β |
| Rhabdomyosarcoma fusion oncoprotein initially pioneers a neural signature in vivo. | Kucinski J et al. | β | 2025 | β |
| Robust prediction of synthetic gRNA activity and cryptic DNA repair by disentangling cellular CRISPR cleavage outcomes. | Riesenberg S et al. | β | 2025 | β |
| sc2GWAS: a comprehensive platform linking single cell and GWAS traits of human. | Yin M et al. | β | 2025 | β |
| Sequence-Only Prediction of Super-Enhancers in Human Cell Lines Using Transformer Models. | Kravchuk EV et al. | β | 2025 | β |
| Sequences within and upstream of the mouse Ets1 gene drive high level expression in B cells, but are not sufficient for consistent expression in T cells. | Kearly A et al. | β | 2025 | β |
| Sex-specific association of IDO1 gene with schizophrenia and imbalanced levels of cytokines and neuroactive kynurenine metabolites in relapsed patients. | Ben Afia A et al. | β | 2025 | β |
| Sialylated IgG induces the transcription factor REST in alveolar macrophages to protect against lung inflammation and severe influenza disease. | Chakraborty S et al. | β | 2025 | β |
| Simulating cell-free chromatin using preclinical cancer models for liquid biopsy applications. | Main SC et al. | β | 2025 | β |
| Single-cell, spatial and bulk transcriptome data analysis revealed LINC00467-mediated Sertoli cell ferroptosis is a potential therapeutic target and biomarker for azoospermia. | Bo H et al. | β | 2025 | β |
| Single-cell transcriptomic and chromatin dynamics of the human brainΒ in PTSD. | Hwang A et al. | β | 2025 | β |
| Somatic mutation as an explanation for epigenetic aging. | Koch Z et al. | β | 2025 | β |
| SpatialSNV: A novel method for identifying and analyzing spatially resolved SNVs in tumor microenvironments. | Liu Y et al. | β | 2025 | β |
| Specification of claustro-amygdalar and palaeocortical neurons and circuits. | Kaur N et al. | β | 2025 | β |
| Statistical relationships across epigenomes using large-scale hierarchical clustering. | Kim A et al. | β | 2025 | β |
| Stereo-seq V2: Spatial mapping of total RNA on FFPE sections with high resolution. | Zhao Y et al. | β | 2025 | β |
| STRchive: a dynamic resource detailing population-level and locus-specific insights at tandem repeat disease loci. | Hiatt L et al. | β | 2025 | β |
| Structural analysis of the lncRNA SChLAP1 reveals protein binding interfaces and a conformationally heterogenous retroviral insertion. | Falese JP et al. | β | 2025 | β |
| Structural variation in 1,019 diverse humans based on long-read sequencing. | Schloissnig S et al. | β | 2025 | β |
| Study of the Patterns of DNA Methylation in Human Cells Through the Prism of Intra-Strand DNA Symmetry. | Ramazanova Z et al. | β | 2025 | β |
| Systematical identification of regulatory GPCRs by single-cell trajectory inference reveals the role of ADGRD1 and GPR39 in adipogenesis. | Ye C et al. | β | 2025 | β |
| Systematic evaluation of de novo mutation calling tools using whole genome sequencing data. | Shah A et al. | β | 2025 | β |
| Systemic genome-epigenome analysis captures a lineage-specific super-enhancer for MYB in gastrointestinal adenocarcinoma. | Li F et al. | β | 2025 | β |
| T2T-CHM13 improves read mapping and detection of clinically relevant genetic variation in the Swedish population. | Schmitz D et al. | β | 2025 | β |
| Tandem ssDNA in neutrophil extracellular traps binds thrombin and regulates immunothrombosis. | Guo W et al. | β | 2025 | β |
| Targeting eRNA-Producing Super-Enhancers Regulates TNFΞ± Expression and Mitigates Chronic Inflammation in Mice and Patient-Derived Immune Cells. | Cho M et al. | β | 2025 | β |
| Terminal differentiation and persistence of effector regulatory Tβcells essential for preventing intestinal inflammation. | Dikiy S et al. | β | 2025 | β |
| Tfcp2l1 as a central integrator of hypoxia, dedifferentiation, and tumor progression. | Clemente-GonzΓ‘lez C et al. | β | 2025 | β |
| The Absence of Association Between NQO1 rs1800566 Polymorphism and Promoter Methylation With the Risk of Preeclampsia. | Pourmahmood M et al. | β | 2025 | β |
| The Expression of a Germline Fusion Gene Involving a Protein-Coding and a Long Non-Coding RNA Gene Results in Severe Brain Malformations. | Kaufmann L et al. | β | 2025 | β |
| The First-Ever Investigation of SNP rs119461977 in SECISBP2/SBP2 Gene and its Implications for Hypothyroidism: A Novel Case-Control Research. | Kaur M et al. | β | 2025 | β |
| The impact of DNA point mutations and epigenetic modifications on the nucleosome wrapping energy. | GiniΕ«naitΔ R et al. | β | 2025 | β |
| The lawc gene emerged de novo from conserved genomic elements and acquired a broad expression pattern in Drosophila. | Cherezov RO et al. | β | 2025 | β |
| The NLRP1 Emerges as a Promising Therapeutic Target and Prognostic Biomarker Across Multiple Cancer Types: A Comprehensive Pan-Cancer Analysis. | Habibipour L et al. | β | 2025 | β |
| The Potential Role of Haploblocks in the Persistence of Small, Isolated Populations of Brook Trout (<i>Salvelinus fontinalis</i>). | Nemeczek CM et al. | β | 2025 | β |
| The recombination landscape of the barn owl, from families to populations. | Topaloudis A et al. | β | 2025 | β |
| The ribonuclease DISL-2 mediates piRNA degradation in C. elegans. | Pastore B et al. | β | 2025 | β |
| The RMaP challenge of predicting RNA modifications by nanopore sequencing. | Spangenberg J et al. | β | 2025 | β |
| The RNA-binding protein YTHDF3 affects gastric cancer cell migration and response to paclitaxel by regulating EZRIN. | Mesquita P et al. | β | 2025 | β |
| The role of genetic testing in accurate diagnosis of X-linked sideroblastic anemia: novel ALAS2 mutations and the impact of X-chromosome inactivation. | JovΓ©-Solavera D et al. | β | 2025 | β |
| The Role of Microarray in Modern Sequencing: Statistical Approach Matters in a Comparison Between Microarray and RNA-Seq. | Raplee ID et al. | β | 2025 | β |
| The significance of PAX5 in Merkel cell carcinoma. | Chteinberg E et al. | β | 2025 | β |
| The sleep-wake history contributes to rhythmic BMAL1 chromatin binding in the cerebral cortex but not in the liver. | Neves C et al. | β | 2025 | β |
| The structural effects of indel polymorphisms outside the binding site on RNA-protein interactions are shaped by selection. | Owusu-Ansah C et al. | β | 2025 | β |
| The transcription factor Traffic jam orchestrates the somatic piRNA pathway in Drosophila ovaries. | Alizada A et al. | β | 2025 | β |
| The Tumor Suppressor p53 Downregulates p107 (<i>RBL1</i>) Through p21-RB/E2F Signaling and Tandem E2F Sites. | Azzahrani K et al. | β | 2025 | β |
| The UCSC Genome Browser database: 2025 update. | Perez G et al. | β | 2025 | β |
| The Ξ±-globin super-enhancer acts in an orientation-dependent manner. | Kassouf MT et al. | β | 2025 | β |
| Total plasma cfDNA methylation in pediatric kidney transplant recipients provides insight into acute allograft rejection pathophysiology. | Spector BL et al. | β | 2025 | β |
| Toward the DNA methylation haplotype map of 11 common solid cancers. | Zhang Z et al. | β | 2025 | β |
| Transcriptional regulation of the piRNA pathway by Ovo in animal ovarian germ cells. | Alizada A et al. | β | 2025 | β |
| Transcription factor occupancy limits DNA methylation and determines ICAM1 expression in breast cancer. | Chen M et al. | β | 2025 | β |
| Transcription factors instruct DNA methylation patterns in plant reproductive tissues. | Xu G et al. | β | 2025 | β |
| Transcriptome and chromatin accessibility divergence during differentiation of a bipotential progenitor cell population to erythroblasts and megakaryocytes. | Mishra T et al. | β | 2025 | β |
| Transcriptomic dynamics of petal development in the one-day flower species, Japanese morning glory (Ipomoea nil). | Nakagawa S et al. | β | 2025 | β |
| Transcriptomic profiling of eyeless Drosophila reveals molecular network orchestrating response to blue light. | Yang J et al. | β | 2025 | β |
| Transcriptomic profiling of unmethylated full mutation carriers implicates TET3 in FMR1 CGG repeat expansion methylation dynamics in fragile X syndrome. | Farmiloe G et al. | β | 2025 | β |
| Transcripts derived from AmnSINE1 repetitive sequences are depleted in the cortex of autism spectrum disorder patients. | Sciaraffa N et al. | β | 2025 | β |
| Transethnic analysis identifies SORL1 variants and haplotypes protective against Alzheimer's disease. | Zhou X et al. | β | 2025 | β |
| Transposable Element-Derived miR-28-5p and miR-708-5p: Exploring Potential Roles in Lung Cancer. | Chira S et al. | β | 2025 | β |
| Two coacting shadow enhancers regulate twin of eyeless expression during early Drosophila development. | Dresch JM et al. | β | 2025 | β |
| Uncovering the complexity of structural variants in four individuals with autism spectrum disorder. | Dada S et al. | β | 2025 | β |
| Unraveling the cohesin-chromatin interface: identifying protein interactions that modulate chromosome structure and function. | Rittenhouse NL et al. | β | 2025 | β |
| Unravelling single-cell DNA replication timing dynamics using machine learning reveals heterogeneity in cancer progression. | Josephides JM et al. | β | 2025 | β |
| Unsupervised Dimensionality Reduction Techniques for the Assessment of ASD Biomarkers. | Jacokes Z et al. | β | 2025 | β |
| Unveiling cell-type-specific microRNA networks through alternative polyadenylation in glioblastoma. | Cihan M et al. | β | 2025 | β |
| Unveiling the role of chromosome structure morphology on gene function through chromosome conformation analysis. | Zhan Y et al. | β | 2025 | β |
| Using GlioVis to Explore, Analyze, and Visualize Brain Tumor Multi-Omics Datasets. | Ang P et al. | β | 2025 | β |
| Using LDpred2 to adapt polygenic risk score techniques for methylation score creation. | SandΓ₯s K et al. | β | 2025 | β |
| Variable Gene Copy Number in Cancer-Related Pathways Is Associated With Cancer Prevalence Across Mammals. | Matthews S et al. | β | 2025 | β |
| VEGF-A cis-located SNPs on human chromosome 6 associated with VEGF-A plasma levels and survival in a coronary disease cohort. | Meza-Alvarado JC et al. | β | 2025 | β |
| Vitamin B12 as an epidrug for regulating peripheral blood biomarkers in long COVID-associated visuoconstructive deficit. | Cassiano LMG et al. | β | 2025 | β |
| WashU Epigenome Browser update 2025. | Seng C et al. | β | 2025 | β |
| Whole genome sequencing identifies novel candidate genetic variants in canine stomatocytosis. | Wallace MD et al. | β | 2025 | β |
| Widespread association of Polycomb complex-deposited histone H2A monoubiquitylation with enhancers and neuronal gene regulation. | MacGillivray K et al. | β | 2025 | β |
| XBP1s-EDEM2 Prevents the Onset and Development of HFpEF by Ameliorating Cardiac Lipotoxicity. | Fonseka O et al. | β | 2025 | β |
| Z-GENIE: a user-friendly R/Shiny resource for predicting Z-DNA forming regions in DNA. | Garza Reyna A et al. | β | 2025 | β |
| ZNF143 binds DNA and stimulates transcription initiation to activate and repress direct target genes. | Dong J et al. | β | 2025 | β |
| 1,25(OH)2D3 increase osteogenic potential of human periodontal ligament cells with low osteoblast potential. | Pereira BC et al. | β | 2024 | β |
| 2q31 microdeletion syndrome with the velocardiofacial phenotype and review of the literature: a case report. | Candelo E et al. | β | 2024 | β |
| A 39βkb structural variant causing Lynch Syndrome detected by optical genome mapping and nanopore sequencing. | BjΓΈrnstad PM et al. | β | 2024 | β |
| A candidate sex determination locus in amphibians which evolved by structural variation between X- and Y-chromosomes. | Kuhl H et al. | β | 2024 | β |
| ACMG/AMP variant classification framework in arginase 1 deficiency: Implications for birth prevalence estimates and diagnostics. | Cameron JM et al. | β | 2024 | β |
| Activation of recombinases at specific DNA loci by zinc-finger domain insertions. | Mukhametzyanova L et al. | β | 2024 | β |
| Acute promyelocytic leukemia with <i>PML/RARA</i> (bcr1, bcr2 and bcr3) transcripts in a pediatric patient. | Santana-HernΓ‘ndez J et al. | β | 2024 | β |
| ADNP modulates SINE B2-derived CTCF-binding sites during blastocyst formation in mice. | Wang W et al. | β | 2024 | β |
| A familial deletion of 10p12.1 associated with thrombocytopenia. | Manohar S et al. | β | 2024 | β |
| A fluid biomarker reveals loss of TDP-43 splicing repression in presymptomatic ALS-FTD. | Irwin KE et al. | β | 2024 | β |
| A genetic basis for sex differences in Xp11 translocation renal cell carcinoma. | Achom M et al. | β | 2024 | β |
| Aging differentially alters the transcriptome and landscape of chromatin accessibility in the male and female mouse hippocampus. | Achiro JM et al. | β | 2024 | β |
| A global gene regulatory program and its region-specific regulator partition neurons into commissural and ipsilateral projection types. | Masuda A et al. | β | 2024 | β |
| A GREB1-steroid receptor feedforward mechanism governs differential GREB1 action in endometrial function and endometriosis. | Chadchan SB et al. | β | 2024 | β |
| A homozygous stop codon in HORMAD2 in a patient with recurrent digynic triploid miscarriage. | Liang M et al. | β | 2024 | β |
| A human progeria-associated BAF-1 mutation modulates gene expression and accelerates aging in C. elegans. | Romero-Bueno R et al. | β | 2024 | β |
| AI approaches for the discovery and validation of drug targets. | Wenteler A et al. | β | 2024 | β |
| AIbZIP/CREB3L4 Promotes Cell Proliferation via the SKP2-p27 Axis in Luminal Androgen Receptor Subtype Triple-Negative Breast Cancer. | Ito T et al. | β | 2024 | β |
| A <i>De Novo</i> Noncoding <i>RARB</i> Variant Associated with Complex Microphthalmia Alters a Putative Regulatory Element. | Replogle MR et al. | β | 2024 | β |
| A large deletion in a non-coding regulatory region leads to NFKB1 haploinsufficiency in two adult siblings. | Fusaro M et al. | β | 2024 | β |
| ALDH1A3-acetaldehyde metabolism potentiates transcriptional heterogeneity in melanoma. | Lu Y et al. | β | 2024 | β |
| A low-input high resolution sequential chromatin immunoprecipitation method captures genome-wide dynamics of bivalent chromatin. | Seneviratne JA et al. | β | 2024 | β |
| AlphaFun: Structural-Alignment-Based Proteome Annotation Reveals why the Functionally Unknown Proteins (uPE1) Are So Understudied. | Pan H et al. | β | 2024 | β |
| Altered drug metabolism and increased susceptibility to fatty liver disease in a mouse model of myotonic dystrophy. | Dewald Z et al. | β | 2024 | β |
| Alternative splicing decouples local from global PRC2 activity. | Arecco N et al. | β | 2024 | β |
| AltGosling: automatic generation of text descriptions for accessible genomics data visualization. | Smits TC et al. | β | 2024 | β |
| AMAR-seq: Automated Multimodal Sequencing of DNA Methylation, Chromatin Accessibility, and RNA Expression with Single-Cell Resolution. | Zeng X et al. | β | 2024 | β |
| A method for evaluating of RNA's coding potential using the interaction effects of open reading frames and high-energy scalograms. | Gao H et al. | β | 2024 | β |
| Analyses of the <i>MYBL1</i> Gene in Triple Negative Breast Cancer: Evidence of Regulation of the <i>VCPIP1</i> Gene and Identification of a Specific Exon Overexpressed in Tumor Cell Lines. | Nganya C et al. | β | 2024 | β |
| Analysis of gene expression in the postmortem brain of neurotypical Black Americans reveals contributions of genetic ancestry. | Benjamin KJM et al. | β | 2024 | β |
| Analyzing somatic mutations by single-cell whole-genome sequencing. | Zhang L et al. | β | 2024 | β |
| An examination of differences in epigenetic methylation of saliva type samples based on collection method. | Ghemrawi M et al. | β | 2024 | β |
| Anorectal malformations. | de Blaauw I et al. | β | 2024 | β |
| A novel deletion in the BLOC1S6 Gene Associated with Hermansky-Pudlak syndrome type 9 (HPS-9). | Kahani SM et al. | β | 2024 | β |
| A novel SMARCC1 BAFopathy implicates neural progenitor epigenetic dysregulation in human hydrocephalus. | Singh AK et al. | β | 2024 | β |
| A Pan-Cancer Analysis of the Oncogenic Role of CD276 in Human Tumors. | Liu L et al. | β | 2024 | β |
| A pan-cancer analysis ofΒ Wnt family member 7BΒ in human cancers. | Wang R et al. | β | 2024 | β |
| A Pilot Study of Multiplex Ligation-Dependent Probe Amplification Evaluation of Copy Number Variations in Romanian Children with Congenital Heart Defects. | BolunduΘ AC et al. | β | 2024 | β |
| A Rare Inherited Bone Marrow Failure Syndrome Disclosed by Reanalysis of the Exome Data of a Patient Evaluated for Cytopenia and Dysmorphic Features. | Durmaz D et al. | β | 2024 | β |
| A reference genome for ecological restoration of the sunflower sea star, Pycnopodia helianthoides. | Schiebelhut LM et al. | β | 2024 | β |
| A region on chromosome 16 is associated with Doberman Pinscher dilated cardiomyopathy. | Polenberg A et al. | β | 2024 | β |
| A role for SNU66 in maintaining 5' splice site identity during spliceosome assembly. | Sarka K et al. | β | 2024 | β |
| Artificial Intelligence-Based Mitosis Scoring in Breast Cancer: Clinical Application. | Ibrahim A et al. | β | 2024 | β |
| ASS1 metabolically contributes to the nuclear and cytosolic p53-mediated DNA damage response. | Lim LQJ et al. | β | 2024 | β |
| Association Between <i>AIRE</i> Polymorphisms rs870881(C>T), rs1003854(T>C) and Rheumatoid Arthritis Risk: A Hungarian Case-control Study. | Berczi B et al. | β | 2024 | β |
| Association of BDNF risk variant and dorsolateral cortical thickness with long-term treatment response to valproate in type I bipolar disorder: An exploratory study. | RodrΓguez-RamΓrez AM et al. | β | 2024 | β |
| Association of common and rare variants with Alzheimer's disease in more than 13,000 diverse individuals with whole-genome sequencing from the Alzheimer's Disease Sequencing Project. | Lee WP et al. | β | 2024 | β |
| ATM-dependent Phosphorylation of Nemo SQ Motifs Is Dispensable for Nemo-mediated Gene Expression Changes in Response to DNA Double-Strand Breaks. | Glynn RA et al. | β | 2024 | β |
| A transcriptomic atlas of the human brain reveals genetically determined aspects of neuropsychiatric health. | Bledsoe X et al. | β | 2024 | β |
| A transposable element prevents severe hemophilia B and provides insights into the evolution of new- and old world primates. | Kopp J et al. | β | 2024 | β |
| A type 1 immunity-restricted promoter of the IL-33 receptor gene directs antiviral T-cell responses. | Brunner TM et al. | β | 2024 | β |
| A validated heart-specific model for splice-disrupting variants in childhood heart disease. | Lesurf R et al. | β | 2024 | β |
| A variant in the 5'UTR of ERBB4 is associated with lifespan in Golden Retrievers. | Rebhun RB et al. | β | 2024 | β |
| BaRDIC: robust peak calling for RNA-DNA interaction data. | Mylarshchikov DE et al. | β | 2024 | β |
| Behavioral screening reveals a conserved residue in Y-Box RNA-binding protein required for associative learning and memory in C. elegans. | Hayden AN et al. | β | 2024 | β |
| Blood DNA methylation profiling identifies cathepsin Z dysregulation in pulmonary arterial hypertension. | Ulrich A et al. | β | 2024 | β |
| Blood flow regulates acvrl1 transcription via ligand-dependent Alk1 activity. | Anzell AR et al. | β | 2024 | β |
| Body mass index stratified meta-analysis of genome-wide association studies of polycystic ovary syndrome in women of European ancestry. | Burns K et al. | β | 2024 | β |
| Bromodomain Proteins Epigenetically Regulate the Mitotically Associated lncRNA MANCR in Triple Negative Breast Cancer Cells. | Tracy KM et al. | β | 2024 | β |
| Case-Case Genome-Wide Analyses Identify Subtype-Informative Variants That Confer Risk for Breast Cancer. | Sun X et al. | β | 2024 | β |
| CDMPred: a tool for predicting cancer driver missense mutations with high-quality passenger mutations. | Wang L et al. | β | 2024 | β |
| Cell-free DNA end characteristics enable accurate and sensitive cancer diagnosis. | Ju J et al. | β | 2024 | β |
| Characterization of a New Variant in <i>ARHGAP31</i> Probably Involved in Adams-Oliver Syndrome in a Family with a Variable Phenotypic Spectrum. | Santaniello C et al. | β | 2024 | β |
| Characterization of MYBL1 Gene in Triple-Negative Breast Cancers and the Genes' Relationship to Alterations Identified at the Chromosome 8q Loci. | Player A et al. | β | 2024 | β |
| Chromatin interaction maps identify oncogenic targets of enhancer duplications in cancer. | Song Y et al. | β | 2024 | β |
| Chromosomal structural rearrangements implicate long non-coding RNAs in rare germline disorders. | Andersen RE et al. | β | 2024 | β |
| Circulating anti-MΓΌllerian hormone levels in pre-menopausal women: novel genetic insights from a genome-wide association meta-analysis. | Pujol-Gualdo N et al. | β | 2024 | β |
| Circulating large extracellular vesicles as diagnostic biomarkers of indeterminate thyroid nodules: multi-platform omics analysis. | Ahmed NM et al. | β | 2024 | β |
| Cis-regulatory control of transcriptional timing and noise in response to estrogen. | Ginley-Hidinger M et al. | β | 2024 | β |
| Cleavage Under Targets and Release Using Nuclease (CUT&RUN) in Macrophages. | Babl A et al. | β | 2024 | β |
| Clinically-observed FOXA1 mutations upregulate SEMA3C through transcriptional derepression in prostate cancer. | Tam KJ et al. | β | 2024 | β |
| Clinically significant findings in a decade-long retrospective study of prenatal chromosomal microarray testing. | Olayiwola JO et al. | β | 2024 | β |
| CmirC update 2024: a multi-omics database for clustered miRNAs. | Ware AP et al. | β | 2024 | β |
| CNVDeep: deep association of copy number variants with neurocognitive disorders. | Rahaie Z et al. | β | 2024 | β |
| Coagulation factor V in breast cancer: a p53-regulated tumor suppressor and predictive marker for treatment response to chemotherapy. | Lind SM et al. | β | 2024 | β |
| Collisions of RNA polymerases behind the replication fork promote alternative RNA splicing in newly replicated chromatin. | Bruno F et al. | β | 2024 | β |
| Common variation in a long non-coding RNA gene modulates variation of circulating TGF-Ξ²2 levels in metastatic colorectal cancer patients (Alliance). | Quintanilha JCF et al. | β | 2024 | β |
| Comparative Genomics of the World's Smallest Mammals Reveals Links to Echolocation, Metabolism, and Body Size Plasticity. | Cossette ML et al. | β | 2024 | β |
| Comparative reservoir competence of <i>Peromyscus leucopus</i>, C57BL/6J, and C3H/HeN for <i>Borrelia burgdorferi</i> B31. | Bourgeois JS et al. | β | 2024 | β |
| Comprehensive characterization of ERV-K (HML-8) in the chimpanzee genome revealed less genomic activity than humans. | Wang C et al. | β | 2024 | β |
| Comprehensive molecular profiling identifies actionable biomarkers for patients from Thailand and the United Arab Emirates with advanced malignancies. | Dawood S et al. | β | 2024 | β |
| Constitutional Chromothripsis on Chromosome 2: A Rare Case with Severe Presentation. | Hasnain A et al. | β | 2024 | β |
| Constitutive and Conditional Epitope Tagging of Endogenous G-Protein-Coupled Receptors in <i>Drosophila</i>. | Bonanno SL et al. | β | 2024 | β |
| Context-dependent genomic locus effects on antibody production in recombinant Chinese hamster ovary cells generated through random integration. | Woo HJ et al. | β | 2024 | β |
| Control-FREEC viewer: a tool for the visualization and exploration of copy number variation data. | Crippa V et al. | β | 2024 | β |
| Convergent Degenerated Regulatory Elements Associated with Limb Loss in Limbless Amphibians and Reptiles. | Zhu C et al. | β | 2024 | β |
| Convergent genomic signatures associated with vertebrate viviparity. | Eastment RV et al. | β | 2024 | β |
| Core regions in immunoglobulin heavy chain enhancers essential for survival of non-Hodgkin lymphoma cells are identified by a CRISPR interference screen. | Kasprzyk ME et al. | β | 2024 | β |
| Cross-continental environmental and genome-wide association study on children and adolescent anxiety and depression. | Thapaliya B et al. | β | 2024 | β |
| Cross-Omic Transcription Factor Analysis: An Insight on Transcription Factor Accessibility and Expression Correlation. | Martini L et al. | β | 2024 | β |
| Curare and GenExVis: a versatile toolkit for analyzing and visualizing RNA-Seq data. | Blumenkamp P et al. | β | 2024 | β |
| DDI2 protease controls embryonic development and inflammation via TCF11/NRF1. | Nedomova M et al. | β | 2024 | β |
| Deciphering the Role of ERBB3 Isoforms in Renal Cell Carcinoma: A Comprehensive Genomic and Transcriptomic Analysis. | Kim M et al. | β | 2024 | β |
| Decoding the Role of NEIL1 Gene in DNA Repair and Lifespan: A Literature Review with Bioinformatics Analysis. | Mohajeri Khorasani A et al. | β | 2024 | β |
| Denisovan admixture facilitated environmental adaptation in Papua New Guinean populations. | Yermakovich D et al. | β | 2024 | β |
| Developmental Dyslexia: Insights from EEG-Based Findings and Molecular Signatures-A Pilot Study. | Theodoridou D et al. | β | 2024 | β |
| Development of a novel five-dye panel for human identification insertion/deletion (INDEL) polymorphisms. | Avellaneda LL et al. | β | 2024 | β |
| Development of a web-based high-throughput marker design program: CAPS (cleaved amplified polymorphic sequence) Maker. | Park JS et al. | β | 2024 | β |
| Development of sexual dimorphism of skeletal muscles through the adrenal cortex, caused by androgen-induced global gene suppression. | Takahashi F et al. | β | 2024 | β |
| Dietary carbohydrate sources differently prime the microbial ecosystem but not the epithelial gene expression profile along the complete gut of young calves. | Hartinger T et al. | β | 2024 | β |
| Dietary fructose enhances tumour growth indirectly via interorgan lipid transfer. | Fowle-Grider R et al. | β | 2024 | β |
| Disregarding multimappers leads to biases in the functional assessment of NGS data. | Almeida da Paz M et al. | β | 2024 | β |
| Disruption of H3K36 methylation provokes cellular plasticity to drive aberrant glandular formation and squamous carcinogenesis. | Ko EK et al. | β | 2024 | β |
| Distinct epicardial gene regulatory programs drive development and regeneration of the zebrafish heart. | Weinberger M et al. | β | 2024 | β |
| DNA and RNA base editors can correct the majority of pathogenic single nucleotide variants. | Dadush A et al. | β | 2024 | β |
| DNA-guided transcription factor cooperativity shapes face and limb mesenchyme. | Kim S et al. | β | 2024 | β |
| DNA methylation landscapes in DIPG reveal methylome variability that can be modified pharmacologically. | Tetens AR et al. | β | 2024 | β |
| DrivR-Base: a feature extraction toolkit for variant effect prediction model construction. | Francis A et al. | β | 2024 | β |
| Drosophila kikkawai - Sox102F. | Mo M et al. | β | 2024 | β |
| Drug repurposing for cancer therapy. | Xia Y et al. | β | 2024 | β |
| Duplications and Retrogenes Are Numerous and Widespread in Modern Canine Genomic Assemblies. | Nguyen AK et al. | β | 2024 | β |
| DUX4-induced HSATII transcription causes KDM2A/B-PRC1 nuclear foci and impairs DNA damage response. | Arends T et al. | β | 2024 | β |
| Early moderate prenatal alcohol exposure and maternal diet impact offspring DNA methylation across species. | Bestry M et al. | β | 2024 | β |
| Ectopic enhancer-enhancer interactions as causal forces driving RNA-directed DNA methylation in gene regulatory regions. | Yang Y et al. | β | 2024 | β |
| Efficient Construction and Utilization of k-Ordered FM-indexes with kISS for Ultra-Fast Read Mapping in Large Genomes. | Yang ZD et al. | β | 2024 | β |
| Elevated nuclear TDP-43 induces constitutive exon skipping. | Carmen-Orozco RP et al. | β | 2024 | β |
| Emergence of the ZNF675 Gene During Primate Evolution-Influenced Human Neurodevelopment Through Changing HES1 Autoregulation. | Lodewijk GA et al. | β | 2024 | β |
| Emerging Signatures of Hematological Malignancies from Gene Expression and Transcription Factor-Gene Regulations. | Dall'Olio D et al. | β | 2024 | β |
| Emx2 underlies the development and evolution of marsupial gliding membranes. | Moreno JA et al. | β | 2024 | β |
| Endogenous retroviruses mediate transcriptional rewiring in response to oncogenic signaling in colorectal cancer. | Ivancevic A et al. | β | 2024 | β |
| Epigenetic associations in HPA axis genes related to bronchopulmonary dysplasia and antenatal steroids. | Hodge KM et al. | β | 2024 | β |
| Epigenetic reprogramming driving successful and failed repair in acute kidney injury. | Muto Y et al. | β | 2024 | β |
| Epigenome-wide association study of long-term psychosocial stress in older adults. | Opsasnick LA et al. | β | 2024 | β |
| Epigenome-wide mediation analysis of the relationship between psychosocial stress and cardiometabolic risk factors in the Health and Retirement Study (HRS). | Opsasnick LA et al. | β | 2024 | β |
| Epigenomic partitioning of a polygenic risk score for asthma reveals distinct genetically driven disease pathways. | Stikker B et al. | β | 2024 | β |
| EpiVar Browser: advanced exploration of epigenomics data under controlled access. | Lougheed DR et al. | β | 2024 | β |
| ePRINT: exonuclease assisted mapping of protein-RNA interactions. | Hawkins S et al. | β | 2024 | β |
| Evaluating the regulatory function of non-coding autism-associated single nucleotide polymorphisms on gene expression in human brain tissue. | Pugsley K et al. | β | 2024 | β |
| Evolution and subfamilies of HERVL human endogenous retrovirus. | Zhang H et al. | β | 2024 | β |
| Evolutionary conservation of VSX2 super-enhancer modules in retinal development. | Honnell V et al. | β | 2024 | β |
| Evolutionary diversity of CXCL16-CXCR6: Convergent substitutions and recurrent gene loss in sauropsids. | Salve BG et al. | β | 2024 | β |
| Excessive MYC-topoisome activity triggers acute DNA damage, MYC degradation, and replacement by a p53-topoisome. | Das SK et al. | β | 2024 | β |
| Exome sequencing reveals genetic heterogeneity in consanguineous Pakistani families with neurodevelopmental and neuromuscular disorders. | Bibi A et al. | β | 2024 | β |
| Extensive Loss and Gain of Conserved Noncoding Elements During Early Teleost Evolution. | Iliopoulou E et al. | β | 2024 | β |
| FACT mediates the depletion of macroH2A1.2 to expedite gene transcription. | Ji D et al. | β | 2024 | β |
| Familial Exudative Vitreoretinopathy With and Without Pathogenic Variants of Norrin/Ξ²-Catenin Signaling Genes. | Kondo H et al. | β | 2024 | β |
| FOXC1 regulates endothelial CD98 (LAT1/4F2hc) expression in retinal angiogenesis and blood-retina barrier formation. | Bhakuni T et al. | β | 2024 | β |
| From Genome-wide Association Studies to Functional Variants: ARL14 Cis-regulatory Variants Are Associated With Severe Malaria. | Adjemout M et al. | β | 2024 | β |
| Full characterization of unresolved structural variation through long-read sequencing and optical genome mapping. | De Clercq G et al. | β | 2024 | β |
| Functional analyses of the polycomb-group genes in sea lamprey embryos undergoing programmed DNA loss. | Saraceno C et al. | β | 2024 | β |
| Functional dissection of human cardiac enhancers and noncoding de novo variants in congenital heart disease. | Xiao F et al. | β | 2024 | β |
| Fusion of Platelet Derived Growth Factor Receptor Alpha (<i>PDGFRA</i>) With Ubiquitin Specific Peptidase 8 (<i>USP8</i>) in a Calcified Chondroid Mesenchymal Neoplasm Harboring t(4;15)(q12;q21) as a Sole Aberration. | Panagopoulos I et al. | β | 2024 | β |
| Gene-gene and gene-environmental interaction of dopaminergic system genes in Pakistani children with attention deficit hyperactivity disorder. | Ansari MA et al. | β | 2024 | β |
| Gene model for the ortholog <i>Myc</i> in <i>Drosophila ananassae</i>. | Myers A et al. | β | 2024 | β |
| Gene model for the ortholog of <i>DENR</i> in <i>Drosophila yakuba</i>. | Laskowski LF et al. | β | 2024 | β |
| Gene model for the ortholog of <i>Glys</i> in <i>Drosophila yakuba</i>. | Koehler AC et al. | β | 2024 | β |
| Gene model for the ortholog of <i>ImpL2</i> in <i>Drosophila simulans</i>. | Lawson ME et al. | β | 2024 | β |
| Gene model for the ortholog of <i>Myc</i> in <i>Drosophila eugracilis</i>. | Lawson ME et al. | β | 2024 | β |
| Gene model for the ortholog of <i>Pten</i> in <i>Drosophila miranda</i>. | Lawson ME et al. | β | 2024 | β |
| Gene model for the ortholog of <i>S6k</i> in <i>Drosophila yakuba</i>. | Keirn G et al. | β | 2024 | β |
| Gene model for the ortholog of <i>Thor</i> in <i>Drosophila yakuba</i>. | Dasgupta J et al. | β | 2024 | β |
| Gene model for the ortholog of <i>Dsor1</i> in <i>Drosophila persimilis</i>. | Koehler AC et al. | β | 2024 | β |
| Gene model for the ortholog of <i>Ilp5</i> in <i>Drosophila ananassae</i>. | Lawson ME et al. | β | 2024 | β |
| Generative Deep Neural Networks for Estimating Hypervariability in Hepatitis B and C Virus Genomes | Saqib S et al. | β | 2024 | β |
| Genetically Encoded Trensor Circuits Report HeLa Cell Treatment with Polyplexed Plasmid DNA and Small-Molecule Transfection Modulators. | Redwood-Sawyerr C et al. | β | 2024 | β |
| Genetic ancestry in population pharmacogenomics unravels distinct geographical patterns related to drug toxicity. | Karamperis K et al. | β | 2024 | β |
| Genetic and clinical characterization of a novel FH founder mutation in families with hereditary leiomyomatosis and renal cell cancer syndrome. | SΓ‘nchez-Heras AB et al. | β | 2024 | β |
| Genetic Characterization of Pediatric Mixed Phenotype Acute Leukemia (MPAL). | Panagopoulos I et al. | β | 2024 | β |
| Genetic complexity of killer-cell immunoglobulin-like receptor genes in human pangenome assemblies. | Hung TK et al. | β | 2024 | β |
| Genetic imputation of kidney transcriptome, proteome and multi-omics illuminates new blood pressure and hypertension targets. | Xu X et al. | β | 2024 | β |
| Genetic investigation of patients with autosomal recessive ataxia and identification of two novel variants in the SQSTM1 and SYNE1 genes. | Mokhtari D et al. | β | 2024 | β |
| Genetic Polymorphisms in Exon 5 and Intron 5 and 7 of <i>AIRE</i> Are Associated with Rheumatoid Arthritis Risk in a Hungarian Population. | BΓ©rczi B et al. | β | 2024 | β |
| Genetics of kidney disorders in Phelan-McDermid syndrome: evidence from 357 registry participants. | McCoy MD et al. | β | 2024 | β |
| Genetic variation near GRB10 associated with bone growth and osteosarcoma risk in canine and human populations. | Lucas SE et al. | β | 2024 | β |
| Genome sequencing reanalysis increases the diagnostic yield in dystonia. | Fellner A et al. | β | 2024 | β |
| Genome-wide analyses reveals an association between invasive urothelial carcinoma in the Shetland sheepdog and NIPAL1. | Parker HG et al. | β | 2024 | β |
| Genome-wide detection of somatic mosaicism at short tandem repeats. | Sehgal A et al. | β | 2024 | β |
| Genome-wide enhancer-associated tandem repeats are expanded in cardiomyopathy. | Mitina A et al. | β | 2024 | β |
| Genome-wide investigation of VNTR motif polymorphisms in 8,222 genomes: Implications for biological regulation and human traits. | Zhang S et al. | β | 2024 | β |
| Genome-wide screening reveals essential roles for HOX genes and imprinted genes during caudal neurogenesis of human embryonic stem cells. | Kinreich S et al. | β | 2024 | β |
| Genomic insights and prognostic significance of novel biomarkers in pancreatic ductal adenocarcinoma: A comprehensive analysis. | Chen Y et al. | β | 2024 | β |
| Germline <i>MYOF1::WNK4</i> and <i>VPS25::MYOF1</i> Chimeras Generated by the Constitutional Translocation t(17;19)(q21;p13) in Two Siblings With Myelodysplastic Syndrome. | Panagopoulos I et al. | β | 2024 | β |
| Germline Sequencing of DNA Damage Repair Genes in Two Hereditary Prostate Cancer Cohorts Reveals New Disease Risk-Associated Gene Variants. | Foley GR et al. | β | 2024 | β |
| Glioma immune microenvironment composition calculator (GIMiCC): a method of estimating the proportions of eighteen cell types from DNA methylation microarray data. | Pike SC et al. | β | 2024 | β |
| GLI Transcriptional Targets S100A7 and KRT16 Show Upregulated Expression Patterns in Epidermis Overlying the Tumor Mass in Melanoma Samples. | KurtoviΔ M et al. | β | 2024 | β |
| G-quadruplex forming regions in GCK and TM6SF2 are targets for differential DNA methylation in metabolic disease and hepatocellular carcinoma patients. | Lahnsteiner A et al. | β | 2024 | β |
| H2AK119ub1 differentially fine-tunes gene expression by modulating canonical PRC1- and H1-dependent chromatin compaction. | Zhao J et al. | β | 2024 | β |
| H3K27me3 is vital for fungal development and secondary metabolite gene silencing, and substitutes for the loss of H3K9me3 in the plant pathogen Fusarium proliferatum. | Studt-Reinhold L et al. | β | 2024 | β |
| Haplotype analysis identifies functional elements in monoclonal gammopathy of unknown significance. | Thomsen H et al. | β | 2024 | β |
| Heritability and Genome-Wide Association Study of Dog Behavioral Phenotypes in a Commercial Breeding Cohort. | Bhowmik N et al. | β | 2024 | β |
| High-coverage nanopore sequencing of samples from the 1000 Genomes Project to build a comprehensive catalog of human genetic variation. | Gustafson JA et al. | β | 2024 | β |
| Higher order interaction analysis quantifies coordination in the epigenome revealing novel biological relationships in Kabuki syndrome. | Cuvertino S et al. | β | 2024 | β |
| Higher TP53BP2 expression is associated with HBsAg loss in peginterferon-Ξ±-treated patients with chronic hepatitis B. | Guan G et al. | β | 2024 | β |
| High level of aneuploidy and recurrent loss of chromosome 11 as relevant features of somatotroph pituitary tumors. | Rymuza J et al. | β | 2024 | β |
| High Prevalence of Familial Hypercholesterolemia Due to the Founder Effect of the LDLR c.2271del Variant in Communities of Oaxaca, Mexico. | RodrΓguez-GutiΓ©rrez PG et al. | β | 2024 | β |
| High-throughput capture of transcription factor-driven epigenome dynamics using PHILO ChIP-seq. | Choudhary A et al. | β | 2024 | β |
| HIV-1 Vpr combats the PU.1-driven antiviral response in primary human macrophages. | Virgilio MC et al. | β | 2024 | β |
| Homozygous <i>HOXC13</i> Variant Causes Pure Hair and Nail Ectodermal Dysplasia via Reduction in Protein Stability. | Clowes V et al. | β | 2024 | β |
| Hsa_circ_0013561 promotes epithelial-mesenchymal transition and tumor progression by regulating ANXA2 via miR-23b-3p in ovarian cancer. | Lv J et al. | β | 2024 | β |
| Human lineage mutations regulate RNA-protein binding of conserved genes <i>NTRK2</i> and <i>ITPR1</i> involved in human evolution. | Cai W et al. | β | 2024 | β |
| HuR (ELAVL1) Stabilizes <i>SOX9</i> mRNA and Promotes Migration and Invasion in Breast Cancer Cells. | Morillo-Bernal J et al. | β | 2024 | β |
| Hypometric genetics: Improved power in genetic discovery by incorporating quality control flags. | Tanigawa Y et al. | β | 2024 | β |
| Hypoxia-inducible microRNA-155 negatively regulates epithelial barrier in eosinophilic esophagitis by suppressing tight junction claudin-7. | Markey GE et al. | β | 2024 | β |
| <i>ABCA4</i>-related retinopathies in Lebanon. | Ibrahim M et al. | β | 2024 | β |
| <i>CircHTT(2,3,4,5,6)</i> <i>-</i> co-evolving with the <i>HTT</i> CAG-repeat tract - modulates Huntington's disease phenotypes. | Morandell J et al. | β | 2024 | β |
| Identification and analysis of short indels inducing exon extension/shrinkage events. | Qu Z et al. | β | 2024 | β |
| Identification of candidate causal variants and target genes at 41 breast cancer risk loci through differential allelic expression analysis. | Xavier JM et al. | β | 2024 | β |
| Identification of novel cattle (Bos taurus) genes and biological insights of their function in pre-implantation embryo development. | Schettini GP et al. | β | 2024 | β |
| Identification of runs of homozygosity (ROHs) in Curraleiro PΓ©-Duro and Pantaneiro cattle breeds. | Santos MF et al. | β | 2024 | β |
| Identification of Surface Markers and Functional Characterization of Myeloid Derived Suppressor Cell-Like Adherent Cells. | Co Soriano JC et al. | β | 2024 | β |
| Identification of target genes co-regulated by four key histone modifications of five key regions in hepatocellular carcinoma. | Liu YX et al. | β | 2024 | β |
| <i>Drosophila kikkawai</i> ortholog of the <i>D. melanogaster</i> Muller D element <i>ash1</i>. | Mo M et al. | β | 2024 | β |
| IDR-targeting compounds suppress HPV genome replication via disruption of phospho-BRD4 association with DNA damage response factors. | Wu SY et al. | β | 2024 | β |
| IL-1Ξ± facilitates GSH synthesis to counteract oxidative stress in oral squamous cell carcinoma under glucose-deprivation. | Ji Y et al. | β | 2024 | β |
| Immune gene regulation is associated with age and environmental adversity in a nonhuman primate. | Watowich MM et al. | β | 2024 | β |
| Impact of genome build on RNA-seq interpretation and diagnostics. | Ungar RA et al. | β | 2024 | β |
| Improved estimation of functional enrichment in SNP heritability using feasible generalized least squares. | Xiong Z et al. | β | 2024 | β |
| Improvement of variant reclassification in genetic neurodevelopmental conditions. | Kowanda M et al. | β | 2024 | β |
| Inference of genomic landscapes using ordered Hidden Markov Models with emission densities (oHMMed). | Vogl C et al. | β | 2024 | β |
| Inherited Retinal Degeneration Caused by Dehydrodolichyl Diphosphate Synthase Mutation-Effect of an <i>ALG6</i> Modifier Variant. | Monson E et al. | β | 2024 | β |
| Inorganic ions activate lineage-specific gene regulatory networks. | Kersey AL et al. | β | 2024 | β |
| In search of a function for human type III interferons: insights from inherited and acquired deficits. | Zhang Q et al. | β | 2024 | β |
| Insight into NSCLC through novel analysis of gene interactions and characteristics. | Pan E et al. | β | 2024 | β |
| In Silico Analysis of the Missense Variants of Uncertain Significance of <i>CTNNB1</i> Gene Reported in GnomAD Database. | Caballero-AvendaΓ±o A et al. | β | 2024 | β |
| Insulin Resistance in Women Correlates with Chromatin Histone Lysine Acetylation, Inflammatory Signaling, and Accelerated Aging. | Vidal CM et al. | β | 2024 | β |
| Integrating Bioinformatics and Machine Learning for Genomic Prediction in Chickens. | Li X et al. | β | 2024 | β |
| Integration of CTCF loops, methylome, and transcriptome in differentiating LUHMES as a model for imprinting dynamics of the 15q11-q13 locus in human neurons. | Gutierrez FugΓ³n OJ et al. | β | 2024 | β |
| Integrative analysis of the lncRNA-miRNA-mRNA interactions in smooth muscle cell phenotypic transitions. | Mahajan A et al. | β | 2024 | β |
| Integrative Bioinformatics Analysis Reveals a Transcription Factor EB-Driven MicroRNA Regulatory Network in Endothelial Cells. | Gravina T et al. | β | 2024 | β |
| Integrative multi-omics analyses to identify the genetic and functional mechanisms underlying ovarian cancer risk regions. | Dareng EO et al. | β | 2024 | β |
| Interferon regulatory factor 4 modulates epigenetic silencing and cancer-critical pathways in melanoma cells. | Sobhiafshar U et al. | β | 2024 | β |
| Inter-subspecies mouse F1 hybrid embryonic stem cell lines newly established for studies of allelic imbalance in gene expression. | Saito A et al. | β | 2024 | β |
| Intracerebral Administration of a Novel Self-Assembling Peptide Hydrogel Is Safe and Supports Cell Proliferation in Experimental Intracerebral Haemorrhage. | Bolan F et al. | β | 2024 | β |
| Intra-host genomic diversity and integration landscape of human tissue-resident DNA virome. | PyΓΆriΓ€ L et al. | β | 2024 | β |
| Inverted triplications formed by iterative template switches generate structural variant diversity at genomic disorder loci. | Grochowski CM et al. | β | 2024 | β |
| IRescue: uncertainty-aware quantification of transposable elements expression at single cell level. | Polimeni B et al. | β | 2024 | β |
| IRF2BP2 counteracts the ATF7/JDP2 AP-1 heterodimer to prevent inflammatory overactivation in acute myeloid leukemia (AML) cells. | Fischer S et al. | β | 2024 | β |
| Iron overload induces dysplastic erythropoiesis and features of myelodysplasia in Nrf2-deficient mice. | Duarte TL et al. | β | 2024 | β |
| <i>ZSCAN25</i> methylation predicts seizures and severe alcohol withdrawal syndrome. | Andersen A et al. | β | 2024 | β |
| JARVIS3: an efficient encoder for genomic data. | Sousa MJP et al. | β | 2024 | β |
| JMnorm: a novel joint multi-feature normalization method for integrative and comparative epigenomics. | Xiang G et al. | β | 2024 | β |
| KAKU4 regulates leaf senescence through modulation of H3K27me3 deposition in the Arabidopsis genome. | Cao Y et al. | β | 2024 | β |
| KMT2D regulates activation, localization, and integrin expression by T-cells. | Potter SJ et al. | β | 2024 | β |
| KNeXT: a NetworkX-based topologically relevant KEGG parser. | Castaneda EU et al. | β | 2024 | β |
| KSHV genome harbors both constitutive and lytically induced enhancers. | Roy Chowdhury N et al. | β | 2024 | β |
| Laparoscopic retroperitoneal lymphadenectomy for ovarian mixed germ cell tumor in a patient with situs inversus totalis; reporting the first case worldwide with literature review and in silico analysis. | Hafez AS et al. | β | 2024 | β |
| Learning genotype-phenotype associations from gaps in multi-species sequence alignments. | Islam UI et al. | β | 2024 | β |
| LINC00470 promotes malignant progression of testicular germ cell tumors. | Liu Z et al. | β | 2024 | β |
| Liver Characterization of a Cohort of Alpha-1 Antitrypsin Deficiency Patients with and without Lung Disease. | Mohammad N et al. | β | 2024 | β |
| Liver eQTL meta-analysis illuminates potential molecular mechanisms of cardiometabolic traits. | Broadaway KA et al. | β | 2024 | β |
| LncRNA HMOX1 alleviates renal ischemia-reperfusion-induced ferroptotic injury via the miR-3587/HMOX1 axis. | Tao W et al. | β | 2024 | β |
| LncRNA MIR31HG fosters stemness malignant features of non-small cell lung cancer via H3K4me1- and H3K27Ace-mediated GLI2 expression. | Chen W et al. | β | 2024 | β |
| Locus folding mechanisms determine modes of antigen receptor gene assembly. | Allyn BM et al. | β | 2024 | β |
| Long non-coding RNAs involved in <i>Drosophila</i> development and regeneration. | Camilleri-Robles C et al. | β | 2024 | β |
| Long-read sequencing and optical genome mapping identify causative gene disruptions in noncoding sequence in two patients with neurologic disease and known chromosome abnormalities. | Sund KL et al. | β | 2024 | β |
| Loops are geometric catalysts for DNA integration. | Battaglia C et al. | β | 2024 | β |
| LOXL2-mediated chromatin compaction is required to maintain the oncogenic properties of triple-negative breast cancer cells. | Serra-Bardenys G et al. | β | 2024 | β |
| <i>ATP1A3</i> Disease Spectrum Includes Paroxysmal Weakness and Encephalopathy Not Triggered by Fever. | Immanneni C et al. | β | 2024 | β |
| Making gene editing accessible in resource limited environments: recommendations to guide a first-time user. | Goolab S et al. | β | 2024 | β |
| Mapping respiratory syncytial virus fusion protein interactions with the receptor IGF1R and the impact of alanine-scanning mutagenesis on viral infection. | Hayes RS et al. | β | 2024 | β |
| Massively parallel reporter assays identify enhancer elements in oesophageal Adenocarcinoma. | Yang SH et al. | β | 2024 | β |
| Mechanism of lactic acidemia-promoted pulmonary endothelial cells death in sepsis: role for CIRP-ZBP1-PANoptosis pathway. | Gong T et al. | β | 2024 | β |
| Mechanisms and Physiological Roles of Polymorphisms in Gestational Diabetes Mellitus. | Suthon S et al. | β | 2024 | β |
| Mechanisms of transcriptional regulation in <i>Anopheles gambiae</i> revealed by allele-specific expression. | Dyer NA et al. | β | 2024 | β |
| Methylome analysis of endothelial cells suggests new insights on sporadic brain arteriovenous malformation. | Scimone C et al. | β | 2024 | β |
| Microproteins encoded by noncanonical ORFs are a major source of tumor-specific antigens in a liver cancer patient meta-cohort. | Camarena ME et al. | β | 2024 | β |
| microT-CNN: an avant-garde deep convolutional neural network unravels functional miRNA targets beyond canonical sites. | Zacharopoulou E et al. | β | 2024 | β |
| miR-31-mediated local translation at the mitotic spindle is important for early development. | Remsburg CM et al. | β | 2024 | β |
| Modeling antisense oligonucleotide therapy in MECP2 duplication syndrome human iPSC-derived neurons reveals gene expression programs responsive to MeCP2 levels. | Bajikar SS et al. | β | 2024 | β |
| Modeling methyl-sensitive transcription factor motifs with an expanded epigenetic alphabet. | Viner C et al. | β | 2024 | β |
| Modeling the effects of consanguinity on autosomal and X-chromosomal runs of homozygosity and identity-by-descent sharing. | Cotter DJ et al. | β | 2024 | β |
| Modulation of prion protein expression through cryptic splice site manipulation. | Gentile JE et al. | β | 2024 | β |
| Molecular Heterogeneity of Osteopetrosis in India: Report of 17 Novel Variants. | Arunachalam AK et al. | β | 2024 | β |
| Molecular regulation of PPARΞ³/RXRΞ± signaling by the novel cofactor ZFP407. | Charrier A et al. | β | 2024 | β |
| Mosaic BRAF Fusions Are a Recurrent Cause of Congenital Melanocytic Nevi Targetable by MAPK Pathway Inhibition. | Martin SB et al. | β | 2024 | β |
| Multi-ancestry meta-analysis of host genetic susceptibility to tuberculosis identifies shared genetic architecture. | Schurz H et al. | β | 2024 | β |
| Multiβdimensional analysis reveals NCKAP5L is a promising biomarker for the diagnosis and prognosis of human cancers, especially colorectal cancer. | Sha Y et al. | β | 2024 | β |
| Multimodal single-cell analyses reveal mechanisms of perianal fistula in diverse patients with Crohn's disease. | Levantovsky RM et al. | β | 2024 | β |
| Multi-omics and pathway analyses of genome-wide associations implicate regulation and immunity in verbal declarative memory performance. | Mei H et al. | β | 2024 | β |
| Multi-omics decipher the immune microenvironment and unveil therapeutic strategies for postoperative ovarian cancer patients. | Liu Z et al. | β | 2024 | β |
| Multiomics-integrated deep language model enables in silico genome-wide detection of transcription factor binding site in unexplored biosamples. | Yang Z et al. | β | 2024 | β |
| Multi-omics integration identifies cell-state-specific repression by PBRM1-PIAS1 cooperation. | Ho PJ et al. | β | 2024 | β |
| Multiple parallel cell lineages in the developing mammalian cerebral cortex. | Del-Valle-Anton L et al. | β | 2024 | β |
| Multiplexed Transactivation of Mammalian Cells Using dFnCas12a-VPR. | Bryson JW et al. | β | 2024 | β |
| [Mutational Signatures Analysis of Micropapillary Components and Exploration of ZNF469 Gene in Early-stage Lung Adenocarcinoma with Ground-glass Opacities]. | Xu Y et al. | β | 2024 | β |
| NANOG controls testicular germ cell tumour stemness through regulation of MIR9-2. | Cardenas RP et al. | β | 2024 | β |
| Nanopore guided annotation of transcriptome architectures. | Abebe JS et al. | β | 2024 | β |
| Nature of epigenetic aging from a single-cell perspective. | Tarkhov AE et al. | β | 2024 | β |
| Navigating the complexity of p53-DNA binding: implications for cancer therapy. | Thayer KM et al. | β | 2024 | β |
| Negative association between higher maternal pre-pregnancy body mass index and breastfeeding outcomes is not mediated by DNA methylation. | Elliott HR et al. | β | 2024 | β |
| NIAGADS Alzheimer's GenomicsDB: A resource for exploring Alzheimer's disease genetic and genomic knowledge. | Greenfest-Allen E et al. | β | 2024 | β |
| Non-canonical transcriptional regulation of the poor prognostic factor UGT2B17 in chronic lymphocytic leukemic and normal B cells. | Rouleau M et al. | β | 2024 | β |
| Noninvasive Lung Cancer Subtype Classification Using Tumor-Derived Signatures and cfDNA Methylome. | Li S et al. | β | 2024 | β |
| Notch3 directs differentiation of brain mural cells from human pluripotent stem cell-derived neural crest. | Gastfriend BD et al. | β | 2024 | β |
| Novel gene fusion discovery in Spitz tumours and its relevance in diagnostics. | Delsupehe L et al. | β | 2024 | β |
| Novel genotype-phenotype correlations, differential cerebellar allele-specific methylation, and a common origin of the (ATTTC)<sub>n</sub> insertion in spinocerebellar ataxia type 37. | Sanchez-Flores M et al. | β | 2024 | β |
| Novel Methodology for the Design of Personalized Cancer Vaccine Targeting Neoantigens: Application to Pancreatic Ductal Adenocarcinoma. | Savsani K et al. | β | 2024 | β |
| Novel variants in CSF1R associated with adult-onset leukoencephalopathy with axonal spheroids and pigmented glia (ALSP). | Schmitz AS et al. | β | 2024 | β |
| Nuclear lamina component KAKU4 regulates chromatin states and transcriptional regulation in the Arabidopsis genome. | Cao Y et al. | β | 2024 | β |
| omicSynth: An open multi-omic community resource for identifying druggable targets across neurodegenerative diseases. | Alvarado CX et al. | β | 2024 | β |
| On a kneading theory for gene-splicing. | Speakman E et al. | β | 2024 | β |
| On the genetic basis of tail-loss evolution in humans and apes. | Xia B et al. | β | 2024 | β |
| Overexpression of FERM Domain Containing Kindlin 2 (FERMT2) in Fibroblasts Correlates with EMT and Immunosuppression in Gastric Cancer. | Yin SY et al. | β | 2024 | β |
| OVO positively regulates essential maternal pathways by binding near the transcriptional start sites in the <i>Drosophila</i> female germline. | Benner L et al. | β | 2024 | β |
| PABP-driven secondary condensed phase within RSV inclusion bodies activates viral mRNAs for ribosomal recruitment. | Zhang Q et al. | β | 2024 | β |
| Pairing a bioinformatics-focused course-based undergraduate research experience with specifications grading in an introductory biology classroom. | Yang MA et al. | β | 2024 | β |
| Parallel Evolution at the Regulatory Base-Pair Level Contributes to Mammalian Interspecific Differences in Polygenic Traits. | Okamoto AS et al. | β | 2024 | β |
| Pathogenic variants in human DNA damage repair genes mostly arose in recent human history. | Zhao B et al. | β | 2024 | β |
| Pathological remodeling of reactive astrocytes: Involvement of DNA methylation and downregulation of homeostatic genes. | Cuautle DG et al. | β | 2024 | β |
| Persistent DNA Methylation Changes across the First Year of Life and Prenatal NO2 Exposure in a Canadian Prospective Birth Study. | Lee S et al. | β | 2024 | β |
| Phylogenomic instructed target analysis reveals ELAV complex binding to multiple optimally spaced U-rich motifs. | McQuarrie DWJ et al. | β | 2024 | β |
| Physical Peculiarity of Two Sites in Human Promoters: Universality and Diverse Usage in Gene Function. | Uemura K et al. | β | 2024 | β |
| Physiological and Pathogenesis Significance of Chorein in Health and Disease. | Alkahtani S et al. | β | 2024 | β |
| PIGB maintains nuclear lamina organization in skeletal muscle of Drosophila. | Yamamoto-Hino M et al. | β | 2024 | β |
| Pioneer Factor Foxa2 Mediates Chromatin Conformation Changes for Activation of Bile Acid Targets of FXR. | Hao Y et al. | β | 2024 | β |
| Placental and immune cell DNA methylation reference panel for bulk tissue cell composition estimation in epidemiological studies. | Campbell KA et al. | β | 2024 | β |
| Pluripotency of a founding field: rebranding developmental biology. | Rogers CD et al. | β | 2024 | β |
| [Polymorphic variants in the cluster of genes encoding trace amine receptors and cognitive functioning in patients with schizophrenia spectrum disorders and healthy controls]. | Alfimova MV et al. | β | 2024 | β |
| Polymorphism rs259983 of the Zinc Finger Protein 831 Gene Increases Risk of Superimposed Preeclampsia in Women with Gestational Diabetes Mellitus. | Karpova N et al. | β | 2024 | β |
| Polymorphisms in transcription factor binding sites and enhancer regions and pancreatic ductal adenocarcinoma risk. | Γnal P et al. | β | 2024 | β |
| Position-dependent function of human sequence-specific transcription factors. | Duttke SH et al. | β | 2024 | β |
| Possible prognostic impact of PKCΞΉ genetic variants in prostate cancer. | Hafeez A et al. | β | 2024 | β |
| Potentially functional genetic variants in ferroptosis-related CREB3 and GALNT14 genes predict survival of hepatitis B virus-related hepatocellular carcinoma. | Zhan S et al. | β | 2024 | β |
| Precise CRISPR-Cas9 gene repair in autologous memory T cells to treat familial hemophagocytic lymphohistiocytosis. | Li X et al. | β | 2024 | β |
| Predicting gene-level sensitivity to JAK-STAT signaling perturbation using a mechanistic-to-machine learning framework. | Cheemalavagu N et al. | β | 2024 | β |
| Prediction of protein-RNA interactions from single-cell transcriptomic data. | Fiorentino J et al. | β | 2024 | β |
| Preferential formation of Z-RNA over intercalated motifs in long noncoding RNA. | Bhatt U et al. | β | 2024 | β |
| Pre-piRNA trimming safeguards piRNAs against erroneous targeting by RNA-dependent RNA polymerase. | Pastore B et al. | β | 2024 | β |
| Primary Ciliary Dyskinesia and Retinitis Pigmentosa: Novel <i>RPGR</i> Variant and Possible Modifier Gene. | Baz-RedΓ³n N et al. | β | 2024 | β |
| Primary osteoarthritis chondrocyte map of chromatin conformation reveals novel candidate effector genes. | Bittner N et al. | β | 2024 | β |
| Primer on fibroblast growth factor 7 (FGF 7). | Zheng Y et al. | β | 2024 | β |
| Processing speed mediates the relationship between DDR1 and psychosocial functioning in euthymic patients with bipolar disorder presenting psychotic symptoms. | Aranda S et al. | β | 2024 | β |
| Profiling of RNA-binding protein binding sites by in situ reverse transcription-based sequencing. | Xiao Y et al. | β | 2024 | β |
| Prognostic and functional role of the nuclear export receptor 1 (XPO1) in gastrointestinal cancers: a potential novel target? | Sokolova V et al. | β | 2024 | β |
| Proteogenomic analysis of human cerebrospinal fluid identifies neurologically relevant regulation and implicates causal proteins for Alzheimer's disease. | Western D et al. | β | 2024 | β |
| Proteogenomic insights into the biology and treatment of pan-melanoma. | Xiang H et al. | β | 2024 | β |
| Protocol for Delivery of CRISPR/dCas9 Systems for Epigenetic Editing into Solid Tumors Using Lipid Nanoparticles Encapsulating RNA. | Woodward EA et al. | β | 2024 | β |
| Publication-ready single nucleotide polymorphism visualization with snipit. | O'Toole Γ et al. | β | 2024 | β |
| Quantitative and qualitative mutational impact of ionizing radiation on normal cells. | Youk J et al. | β | 2024 | β |
| Rapid evolution of promoters from germline-specifically expressed genes including transposon silencing factors. | McQuarrie DWJ et al. | β | 2024 | β |
| Rare copy-number variants as modulators of common disease susceptibility. | Auwerx C et al. | β | 2024 | β |
| Rare genomic copy number variants implicate new candidate genes for bicuspid aortic valve. | Carlisle SG et al. | β | 2024 | β |
| Rare variant analyses in 51,256 type 2 diabetes cases and 370,487 controls reveal the pathogenicity spectrum of monogenic diabetes genes. | Huerta-Chagoya A et al. | β | 2024 | β |
| Reconstructing DNA methylation maps of ancient populations. | Barouch A et al. | β | 2024 | β |
| Recurrent Independent Pseudogenization Events of the Sperm Fertilization Gene ZP3r in Apes and Monkeys. | Carlisle JA et al. | β | 2024 | β |
| Redesigning the Drosophila histone gene cluster: an improved genetic platform for spatiotemporal manipulation of histone function. | Crain AT et al. | β | 2024 | β |
| REEV: review, evaluate and explain variants. | Hramyka D et al. | β | 2024 | β |
| Regionally distinct GFAP promoter expression plays a role in off-target neuron expression following AAV5 transduction. | Enbar T et al. | β | 2024 | β |
| Relationship between sex biases in gene expression and sex biases in autism and Alzheimer's disease. | Fass SB et al. | β | 2024 | β |
| Remodeling Ca<sup>2+</sup> dynamics by targeting a promising E-box containing G-quadruplex at ORAI1 promoter in triple-negative breast cancer. | Chatterjee O et al. | β | 2024 | β |
| Research advances of MAL family members in tumorigenesis and tumor progression (Review). | Li M et al. | β | 2024 | β |
| Retinitis Pigmentosa Associated With EYS Gene Mutations in Puerto Rico: A Case Series. | Ruiz-Justiz AJ et al. | β | 2024 | β |
| RFX6 Maintains Gene Expression and Function of Adult Human Islet Ξ±-Cells. | Coykendall VMN et al. | β | 2024 | β |
| Risk factor prediction and immune correlation analysis of cuproptosis-related gene in osteoarthritis. | Che J et al. | β | 2024 | β |
| RNA G-quadruplex formation in biologically important transcribed regions: can two-tetrad intramolecular RNA quadruplexes be formed? | Basu P et al. | β | 2024 | β |
| Roles of SNORD115 and SNORD116 ncRNA clusters during neuronal differentiation. | Helwak A et al. | β | 2024 | β |
| rs10924104 in the expression enhancer motif of CD58 confers susceptibility to human autoimmune diseases. | Hitomi Y et al. | β | 2024 | β |
| SARS-CoV-2 rapidly evolves lineage-specific phenotypic differences when passaged repeatedly in immune-naΓ―ve mice. | Willett JDS et al. | β | 2024 | β |
| Scalable single-cell profiling of chromatin modifications with sciCUT&Tag. | Janssens DH et al. | β | 2024 | β |
| Screening of functional maternal-specific chromatin regulators in early embryonic development of zebrafish. | Wang Y et al. | β | 2024 | β |
| Screening of Inherited Retinal Disease Patients in a Low-Resource Setting Using an Augmented Next-Generation Sequencing Panel. | Midgley N et al. | β | 2024 | β |
| Serum and salivary Cu/Zn ratio as a diagnostic biomarker for oral submucosal fibrosis: an analysis of trace metals and LOX gene variants. | Shah R et al. | β | 2024 | β |
| Sex affects transcriptional associations with schizophrenia across the dorsolateral prefrontal cortex, hippocampus, and caudate nucleus. | Benjamin KJM et al. | β | 2024 | β |
| Sex-dependent placental methylation quantitative trait loci provide insight into the prenatal origins of childhood onset traits and conditions. | Casazza W et al. | β | 2024 | β |
| Sex differences in MAGEL2 gene promoter methylation in high functioning autism - trends from a pilot study using nanopore Cas9 targeted long read sequencing. | Wieting J et al. | β | 2024 | β |
| Sex-specific impacts of prenatal bisphenol A exposure on genes associated with cortical development, social behaviors, and autism in the offspring's prefrontal cortex. | Kanlayaprasit S et al. | β | 2024 | β |
| Signatures of Co-evolution and Co-regulation in the CYP3A and CYP4F Genes in Humans. | Richard-St-Hilaire A et al. | β | 2024 | β |
| Significant phenotypic variability in a multigenerational family with an <i>NFIA</i> missense mutation: Case series and review of the literature. | Paschell P et al. | β | 2024 | β |
| Single-cell and spatial multiomic inference of gene regulatory networks using SCRIPro. | Chang Z et al. | β | 2024 | β |
| Single-cell long-read sequencing-based mapping reveals specialized splicing patterns in developing and adult mouse and human brain. | Joglekar A et al. | β | 2024 | β |
| Single-cell multi-modal integrative analyses highlight functional dynamic gene regulatory networks directing human cardiac development. | Holman AR et al. | β | 2024 | β |
| Single-cell multi-omics analysis of lineage development and spatial organization in the human fetal cerebellum. | Yang F et al. | β | 2024 | β |
| Single cell-transcriptomic analysis informs the lncRNA landscape in metastatic castration resistant prostate cancer. | Saha D et al. | β | 2024 | β |
| Single variant, yet "double trouble": TSC and KBG syndrome because of a large de novo inversion. | Rodrigues Alves Barbosa V et al. | β | 2024 | β |
| Small-molecule inhibition of the METTL3/METTL14 complex suppresses neuroblastoma tumor growth and promotes differentiation. | Pomaville M et al. | β | 2024 | β |
| Small polymorphisms are a source of ancestral bias in structural variant breakpoint placement. | Audano PA et al. | β | 2024 | β |
| SMPD3 expression is spatially regulated in the developing embryo by SOXE factors. | Piacentino ML et al. | β | 2024 | β |
| Sodium Channel Gene Variants in Fetuses with Abnormal Sonographic Findings: Expanding the Prenatal Phenotypic Spectrum of Sodium Channelopathies. | Hadjipanteli A et al. | β | 2024 | β |
| Somatic nuclear mitochondrial DNA insertions are prevalent in the human brain and accumulate over time in fibroblasts. | Zhou W et al. | β | 2024 | β |
| sscNOVA: a semi-supervised convolutional neural network for predicting functional regulatory variants in autoimmune diseases. | Li H et al. | β | 2024 | β |
| START domains generate paralog-specific regulons from a single network architecture. | Holub AS et al. | β | 2024 | β |
| Stress increases sperm respiration and motility in mice and men. | Moon N et al. | β | 2024 | β |
| Stress-induced mucin 13 reductions drive intestinal microbiome shifts and despair behaviors. | Rivet-Noor CR et al. | β | 2024 | β |
| Structural and functional characterization of an individual with the M285R <i>KCNV2</i> hypomorphic allele. | de Guimaraes TAC et al. | β | 2024 | β |
| Structural and functional determination of peptide versus small molecule ligand binding at the apelin receptor. | Williams TL et al. | β | 2024 | β |
| Structural insights into the human NuA4/TIP60 acetyltransferase and chromatin remodeling complex. | Yang Z et al. | β | 2024 | β |
| Structure and repair of replication-coupled DNA breaks. | Pavani R et al. | β | 2024 | β |
| Super enhancer acquisition drives expression of oncogenic PPP1R15B that regulates protein homeostasis in multiple myeloma. | Xiong S et al. | β | 2024 | β |
| Surface exclusion of IncC conjugative plasmids and their relatives. | Rivard N et al. | β | 2024 | β |
| Systematic evaluation of retroviral LTRs as cis-regulatory elements in mouse embryos. | Yang J et al. | β | 2024 | β |
| Systematic identification of genotype-dependent enhancer variants in eosinophilic esophagitis. | Shook MS et al. | β | 2024 | β |
| Systemic chemokine-modulatory regimen combined with neoadjuvant chemotherapy in patients with triple-negative breast cancer. | Gandhi S et al. | β | 2024 | β |
| Tackling Tissue Macrophage Heterogeneity by SplitCre Transgenesis. | Boura-Halfon S et al. | β | 2024 | β |
| Targeted deletion of the pancreatic Ξ²-cell oxytocin receptor and its effects on metabolic regulation and Ξ²-cell health. | Mendez AJ et al. | β | 2024 | β |
| Targeted design of synthetic enhancers for selected tissues in the Drosophila embryo. | de Almeida BP et al. | β | 2024 | β |
| Targeted Sequencing of Human Satellite 2 Repeat Sequences in Plasma cfDNA Reveals Potential Breast Cancer Biomarkers. | Gezer U et al. | β | 2024 | β |
| Targeted Variant Assessments of Human Endogenous Retroviral Regions in Whole Genome Sequencing Data Reveal Retroviral Variants Associated with Papillary Thyroid Cancer. | Stricker E et al. | β | 2024 | β |
| Targeting PRKDC activates the efficacy of antitumor immunity while sensitizing to chemotherapy and targeted therapy in liver hepatocellular carcinoma. | Pan Y et al. | β | 2024 | β |
| Tempo and mode of gene expression evolution in the brain across primates. | Rickelton K et al. | β | 2024 | β |
| TFCP2 as a therapeutic nexus: unveiling molecular signatures in cancer. | Kaushik N et al. | β | 2024 | β |
| The Complex Landscape of Structural Divergence Between the Drosophila pseudoobscura and D. persimilis Genomes. | Carpinteyro-Ponce J et al. | β | 2024 | β |
| The DoGA consortium expression atlas of promoters and genes in 100 canine tissues. | HΓΆrtenhuber M et al. | β | 2024 | β |
| The Effect of Exposure to Neighborhood Violence on Glucocorticoid Receptor Signaling in Lung Tumors. | Heath H et al. | β | 2024 | β |
| The effect of leptin on trained innate immunity and on systemic inflammation in subjects with obesity. | Flores Gomez D et al. | β | 2024 | β |
| The Genome Explorer genome browser. | Herson J et al. | β | 2024 | β |
| The human PTGR1 gene expression is controlled by TE-derived Z-DNA forming sequence cooperating with miR-6867-5p. | Lee DH et al. | β | 2024 | β |
| The Impact of High Adiposity on Endometrial Progesterone Response and Metallothionein Regulation. | Murphy AR et al. | β | 2024 | β |
| The landscape of 8q24 cytoband in gastric cancer (Review). | Larios-Serrato V et al. | β | 2024 | β |
| The landscape of alternative polyadenylation during EMT and its regulation by the RNA-binding protein Quaking. | Neumann DP et al. | β | 2024 | β |
| The Long Non-Coding RNA Gene <i>AC027288.3</i> Plays a Role in Human Endometrial Stromal Fibroblast Decidualization. | Thapa R et al. | β | 2024 | β |
| The molecular landscape of oculocutaneous albinism in India and its therapeutic implications. | Kohli S et al. | β | 2024 | β |
| The neuroimmune CGRP-RAMP1 axis tunes cutaneous adaptive immunity to the microbiota. | Kulalert W et al. | β | 2024 | β |
| The pan-cancer landscape presented ITGA7 as a prognostic determinant, tumor suppressor, and oncogene in multiple tumor types. | Zarei M et al. | β | 2024 | β |
| The Personalized Inherited Signature Predisposing to Non-Small-Cell Lung Cancer in Non-Smokers. | Serio VB et al. | β | 2024 | β |
| The PNUTS phosphatase complex controls transcription pause release. | Kelley JR et al. | β | 2024 | β |
| The Polycomb system sustains promoters in a deep OFF state by limiting pre-initiation complex formation to counteract transcription. | Szczurek AT et al. | β | 2024 | β |
| Therapeutic CRISPR epigenome editing of inflammatory receptors in the intervertebral disc. | Stover JD et al. | β | 2024 | β |
| The RNA binding proteins LARP4A and LARP4B promote sarcoma and carcinoma growth and metastasis. | Coleman JC et al. | β | 2024 | β |
| The Role of Structural Variants in the Genetic Architecture of Parkinson's Disease. | Miano-Burkhardt A et al. | β | 2024 | β |
| The STAT3/SETDB2 axis dictates NF-ΞΊB-mediated inflammation in macrophages during wound repair. | Mangum KD et al. | β | 2024 | β |
| The study of <i>HMOX1</i> DNA methylation and gene expression and the diagnostic potential of <i>miR-153-3p</i> in preeclampsia. | Rahimi S et al. | β | 2024 | β |
| The transcription factor NF-ΞΊB orchestrates nucleosome remodeling during the primary response to Toll-like receptor 4 signaling. | Feng AC et al. | β | 2024 | β |
| The Wild West of spike-in normalization. | Patel LA et al. | β | 2024 | β |
| The YAP1/TAZ-TEAD transcriptional network regulates gene expression at neuromuscular junctions in skeletal muscle fibers. | Gessler L et al. | β | 2024 | β |
| The YBX3 RNA-binding protein posttranscriptionally controls SLC1A5 mRNA in proliferating and differentiating skeletal muscle cells. | Awad S et al. | β | 2024 | β |
| Tigerfish designs oligonucleotide-based in situ hybridization probes targeting intervals of highly repetitive DNA at the scale of genomes. | Aguilar R et al. | β | 2024 | β |
| Topologically associating domains define the impact of de novo promoter variants on autism spectrum disorder risk. | Nakamura T et al. | β | 2024 | β |
| Torch-eCpG: a fast and scalable eQTM mapper for thousands of molecular phenotypes with graphical processing units. | Kober KM et al. | β | 2024 | β |
| Toward the Development of a Tissue Engineered Gradient Utilizing CRISPR-Guided Gene Modulation. | Weston JD et al. | β | 2024 | β |
| TRAILS: Tree reconstruction of ancestry using incomplete lineage sorting. | Rivas-GonzΓ‘lez I et al. | β | 2024 | β |
| Transcriptional and epigenetic characterization of a new in vitro platform to model the formation of human pharyngeal endoderm. | Cipriano A et al. | β | 2024 | β |
| Transcriptional Regulation of the Human MGP Promoter: Identification of Downstream Repressors. | Caiado H et al. | β | 2024 | β |
| Translation of genome-wide association study: from genomic signals to biological insights. | Bruner WS et al. | β | 2024 | β |
| Transposable elements alter gene expression and may impact response to cisplatin therapy in ovarian cancer. | Mombach DM et al. | β | 2024 | β |
| Transposable elements regulate thymus development and function. | Larouche JD et al. | β | 2024 | β |
| TRIM71 mutations cause a neurodevelopmental syndrome featuring ventriculomegaly and hydrocephalus. | Duy PQ et al. | β | 2024 | β |
| TRPS1 modulates chromatin accessibility to regulate estrogen receptor alpha (ER) binding and ER target gene expression in luminal breast cancer cells. | Scott TG et al. | β | 2024 | β |
| Tumour circular RNAs elicit anti-tumour immunity by encoding cryptic peptides. | Huang D et al. | β | 2024 | β |
| Understanding species-specific and conserved RNA-protein interactions in vivo and in vitro. | Harris SE et al. | β | 2024 | β |
| Unveiling FRG1's DNA repair role in breast cancer. | Shubhanjali S et al. | β | 2024 | β |
| Unveiling novel genetic variants in 370 challenging medically relevant genes using the long read sequencing data of 41 samples from 19 global populations. | Ji Y et al. | β | 2024 | β |
| Unveiling the Genomic Symphony: Identification Cultivar-Specific Genes and Enhanced Insights on Sweet Sorghum Genomes Through Comprehensive superTranscriptomic Analysis. | Nikhil S et al. | β | 2024 | β |
| Unveiling the oncogenic significance of thymidylate synthase in human cancers. | Geng Y et al. | β | 2024 | β |
| Using paired-end read orientations to assess technical biases in capture Hi-C. | Hansen P et al. | β | 2024 | β |
| Variant-to-function analysis of the childhood obesity chr12q13 locus implicates rs7132908 as a causal variant within the 3' UTR of FAIM2. | Littleton SH et al. | β | 2024 | β |
| VARista: a free web platform for streamlined whole-genome variant analysis across T2T, hg38, and hg19. | Hadar N et al. | β | 2024 | β |
| VCAT: an integrated variant function annotation tools. | Huang B et al. | β | 2024 | β |
| VolcanoSV enables accurate and robust structural variant calling in diploid genomes from single-molecule long read sequencing. | Luo C et al. | β | 2024 | β |
| WAS IT A MATch I SAW? Approximate palindromes lead to overstated false match rates in benchmarks using reversed sequences. | Glidden-Handgis G et al. | β | 2024 | β |
| Whole-exome sequencing identifies rare recessive variants in azoospermia patients from consanguineous Pakistani families. | Uddin I et al. | β | 2024 | β |
| Whole-genome bisulfite sequencing data analysis learning module on Google Cloud Platform. | Qin Y et al. | β | 2024 | β |
| Whole genome sequencing in families with oligodontia. | Mitscherling J et al. | β | 2024 | β |
| Wnt signaling regulates chemokine production and cell migration of circulating human monocytes. | Zelikson N et al. | β | 2024 | β |
| Worldwide distribution of genetic factors related to severity of COVID-19 infection. | Esteban ME et al. | β | 2024 | β |
| YAP and TAZ couple osteoblast precursor mobilization to angiogenesis and mechanoregulation in murine bone development. | Collins JM et al. | β | 2024 | β |
| ZBTB48 is a priming factor regulating B-cell-specific CIITA expression. | Rane G et al. | β | 2024 | β |
| Ξ²-Defensin gene copy number variation in cattle. | Sidekli O et al. | β | 2024 | β |
| 3-D chromatin conformation, accessibility, and gene expression profiling of triple-negative breast cancer. | LlinΓ s-Arias P et al. | β | 2023 | β |
| Ablation of <i>OCT4</i> function in cattle embryos by double electroporation of CRISPR-Cas for DNA and RNA targeting (CRISPR-DART). | Nix JL et al. | β | 2023 | β |
| Abundant binary promoter switches in lineage-determining transcription factors indicate a digital component of cell fate determination. | Li H et al. | β | 2023 | β |
| A common single nucleotide polymorphism is associated with inflammation and critical illness outcomes. | El-Dehaibi F et al. | β | 2023 | β |
| A database of restriction maps to expand the utility of bacterial artificial chromosomes. | Winden E et al. | β | 2023 | β |
| A deep population reference panel of tandem repeat variation. | Ziaei Jam H et al. | β | 2023 | β |
| A DNA methylation haplotype block landscape in human tissues and preimplantation embryos reveals regulatory elements defined by comethylation patterns. | Feng Y et al. | β | 2023 | β |
| Alteration of relative telomere length and telomerase reverse transcriptase expression in the granulosa cells of women during aging and assessment of <i>in vitro</i> fertilization outcomes. | Hao Y et al. | β | 2023 | β |
| A New Variant in the PRPF6 Gene Leading to Retinitis Pigmentosa: A Case Report. | Ruiz-Justiz AJ et al. | β | 2023 | β |
| An intronic LINE-1 regulates IFNAR1 expression in human immune cells. | Buttler CA et al. | β | 2023 | β |
| A novel splice-site FHOD3 founder variant is a common cause of hypertrophic cardiomyopathy in the population of the Balkans-A cohort study. | Vodnjov N et al. | β | 2023 | β |
| A Rare 46,X,t(Y;10)(q12;p14) Balanced Translocation in Non-Obstructive Azoospermic Patient with Elevated FSH and LH Levels. | Jahan Syeeda Khursheed K et al. | β | 2023 | β |
| A Rare Variant in <i>MDH2</i> (rs111879470) Is Associated with Predisposition to Recurrent Breast Cancer in an Extended High-Risk Pedigree. | Cannon-Albright LA et al. | β | 2023 | β |
| Association of <i>MGMT</i> Promoter and Enhancer Methylation with Genetic Variants, Clinical Parameters, and Demographic Characteristics in Glioblastoma. | Zappe K et al. | β | 2023 | β |
| Associations between blood leukocyte DNA methylation and sustained attention in mid-to-late childhood. | Ehlinger JV et al. | β | 2023 | β |
| Associations between epigenome-wide DNA methylation and height-related traits among Sub-Saharan Africans: the RODAM study. | Swart G et al. | β | 2023 | β |
| A targeted long-read sequencing approach questions the association of OXTR methylation with high-functioning autism. | Wieting J et al. | β | 2023 | β |
| A tissue dissociation method for ATAC-seq and CUT&RUN in <i>Drosophila</i> pupal tissues. | Buchert EM et al. | β | 2023 | β |
| CATCH-UP: A High-Throughput Upstream-Pipeline for Bulk ATAC-Seq and ChIP-Seq Data. | Riva SG et al. | β | 2023 | β |
| CBLL1 is hypomethylated and correlates with cortical thickness in transgender men before gender affirming hormone treatment. | FernΓ‘ndez R et al. | β | 2023 | β |
| CENTRE: a gradient boosting algorithm for Cell-type-specific ENhancer-Target pREdiction. | Rapakoulia T et al. | β | 2023 | β |
| CHESS 3: an improved, comprehensive catalog of human genes and transcripts based on large-scale expression data, phylogenetic analysis, and protein structure. | Varabyou A et al. | β | 2023 | β |
| CHEX-seq detects single-cell genomic single-stranded DNA with catalytical potential. | Lu Y et al. | β | 2023 | β |
| Circuit-specific gene therapy reverses core symptoms in a primate Parkinson's disease model. | Chen Y et al. | β | 2023 | β |
| Cisplatin exposure alters tRNA-derived small RNAs but does not affect epimutations in C. elegans. | Fallet M et al. | β | 2023 | β |
| Community-wide genome sequencing reveals 30 years of Darwin's finch evolution. | Enbody ED et al. | β | 2023 | β |
| Comparative study of encoded and alignment-based methods for virus taxonomy classification. | Shaukat MA et al. | β | 2023 | β |
| Comparison of Two Variant Analysis Programs for Next-Generation Sequencing Data of Whole Mitochondrial Genome. | Lee SE et al. | β | 2023 | β |
| Comprehensive Analysis of CircRNA Expression Profiles in Multiple Tissues of Pigs. | Shen Q et al. | β | 2023 | β |
| Computational Characterization of Undifferentially Expressed Genes with Altered Transcription Regulation in Lung Cancer. | Xin R et al. | β | 2023 | β |
| Copy number variations and their effect on the plasma proteome. | Schmitz D et al. | β | 2023 | β |
| Cost-effective DNA methylation profiling by FML-seq. | Foley JW et al. | β | 2023 | β |
| CSNK1G2-AS1 promotes metastasis, colony formation and serves as a biomarker in testicular germ cell tumor cells. | Li R et al. | β | 2023 | β |
| Current and future strategies for targeting the endothelin pathway in cardiovascular disease. | Abraham GR et al. | β | 2023 | β |
| Deep transcriptome profiling reveals limited conservation of A-to-I RNA editing in Xenopus. | Nguyen TA et al. | β | 2023 | β |
| De novo transcriptome assembly of mouse male germ cells reveals novel genes, stage-specific bidirectional promoter activity, and noncoding RNA expression. | Gill ME et al. | β | 2023 | β |
| Diagnostic implications of lncRNA NORAD in breast cancer. | Zhang Y et al. | β | 2023 | β |
| Differential innate immune responses of human macrophages and bronchial epithelial cells against <i>Talaromyces marneffei</i>. | Tan Y-P et al. | β | 2023 | β |
| Direct m6A recognition by IMP1 underlays an alternative model of target selection for non-canonical methyl-readers. | Nicastro G et al. | β | 2023 | β |
| Discrimination of cell-intrinsic and environment-dependent effects of natural genetic variation on Kupffer cell epigenomes and transcriptomes. | Bennett H et al. | β | 2023 | β |
| Disrupted propionate metabolism evokes transcriptional changes in the heart by increasing histone acetylation and propionylation. | Park KC et al. | β | 2023 | β |
| Disruption of the autism gene and chromatin regulator KDM5A alters hippocampal cell identity. | El Hayek L et al. | β | 2023 | β |
| Dissecting the basis for differential substrate specificity of ADAR1 and ADAR2. | Zambrano-Mila MS et al. | β | 2023 | β |
| DNA hypomethylation characterizes genes encoding tissue-dominant functional proteins in liver and skeletal muscle. | Maehara H et al. | β | 2023 | β |
| DNA language models are powerful predictors of genome-wide variant effects. | Benegas G et al. | β | 2023 | β |
| DNA Methylation Patterns in Relation to Acute Severity and Duration of Anxiety and Depression. | VidoviΔ E et al. | β | 2023 | β |
| Downregulation of Glycine N-Acyltransferase in Kidney Renal Clear Cell Carcinoma: A Bioinformatic-Based Screening. | MuΓ±oz JP et al. | β | 2023 | β |
| Epigenetic priming of an epithelial enhancer by p63 and CTCF controls expression of a skin-restricted gene XP33. | Smirnov A et al. | β | 2023 | β |
| Epigenetic reprogramming of a distal developmental enhancer cluster drives SOX2 overexpression in breast and lung adenocarcinoma. | Abatti LE et al. | β | 2023 | β |
| Essential role of the Pax5 C-terminal domain in controlling B cell commitment and development. | Gruenbacher S et al. | β | 2023 | β |
| Evaluating 17 methods incorporating biological function with GWAS summary statistics to accelerate discovery demonstrates a tradeoff between high sensitivity and high positive predictive value. | Moore A et al. | β | 2023 | β |
| Evaluating the Effect of Gestational Exposure to Perfluorohexane Sulfonate on Placental Development in Mice Combining Alternative Splicing and Gene Expression Analyses. | Zhang Y et al. | β | 2023 | β |
| Evaluation of Liftover Tools for the Conversion of Genome Reference Consortium Human Build 37 to Build 38 Using ClinVar Variants. | Park KJ et al. | β | 2023 | β |
| Evidence for widespread existence of functional novel and non-canonical human transcripts. | Xu D et al. | β | 2023 | β |
| Fake IDs? Widespread misannotation of DNA transposons as a general transcription factor. | Hassan NT et al. | β | 2023 | β |
| Fascin-1 expression is associated with neuroendocrine prostate cancer and directly suppressed by androgen receptor. | Turpin A et al. | β | 2023 | β |
| Formaldehyde regulates <i>S</i>-adenosylmethionine biosynthesis and one-carbon metabolism. | Pham VN et al. | β | 2023 | β |
| From multi-omics approaches to personalized medicine in myocardial infarction. | Zhan C et al. | β | 2023 | β |
| Functional filter for whole-genome sequencing data identifies HHT and stress-associated non-coding SMAD4 polyadenylation site variants >5 kb from coding DNA. | Xiao S et al. | β | 2023 | β |
| Functional Insight into and Refinement of the Genomic Boundaries of the <i>JARID2</i>-Neurodevelopmental Disorder Episignature. | van der Laan L et al. | β | 2023 | β |
| Function of m<sup>5</sup>C RNA methyltransferase NOP2 in high-grade serous ovarian cancer. | Yang S et al. | β | 2023 | β |
| GATA transcription factors drive initial Xist upregulation after fertilization through direct activation of long-range enhancers. | Ravid Lustig L et al. | β | 2023 | β |
| Gene-metabolite annotation with shortest reactional distance enhances metabolite genome-wide association studies results. | Baron C et al. | β | 2023 | β |
| Genetic Association and Differential RNA Expression of Histone (De)Acetylation-Related Genes in Pemphigus Foliaceus-A Possible Epigenetic Effect in the Autoimmune Response. | Sulzbach Denardin M et al. | β | 2023 | β |
| Genetic Contribution to End-Stage Cardiomyopathy Requiring Heart Transplantation. | Kim Y et al. | β | 2023 | β |
| Genetic Variants Associated With Hidradenitis Suppurativa. | Sun Q et al. | β | 2023 | β |
| Genome Report: chromosome-scale genome assembly of the African spiny mouse (Acomys cahirinus). | Nguyen ED et al. | β | 2023 | β |
| Genome-wide identification of dominant polyadenylation hexamers for use in variant classification. | Shiferaw HK et al. | β | 2023 | β |
| Genomic analysis of the rhesus macaque (<i>Macaca mulatta</i>) and the cynomolgus macaque (<i>Macaca fascicularis</i>) uncover polygenic signatures of reinforcement speciation. | Bailey N et al. | β | 2023 | β |
| Genomic architecture of autism spectrum disorder in Qatar: The BARAKA-Qatar Study. | Abdi M et al. | β | 2023 | β |
| Genotype imputation accuracy and the quality metrics of the minor ancestry in multi-ancestry reference panels. | Shi M et al. | β | 2023 | β |
| GJA3 Genetic Variation and Autosomal Dominant Congenital Cataracts and Glaucoma Following Cataract Surgery. | Boese EA et al. | β | 2023 | β |
| Global identification of SWI/SNF targets reveals compensation by EP400. | Martin BJE et al. | β | 2023 | β |
| G-quadruplex is critical to epigenetic activation of the lncRNA HOTAIR in cancer cells. | Qu X et al. | β | 2023 | β |
| High throughput compound screening in neuronal cells identifies statins as activators of ataxin 3 expression. | Stahl F et al. | β | 2023 | β |
| HNF1Ξ± maintains pancreatic Ξ± and Ξ² cell functions in primary human islets. | Qian MF et al. | β | 2023 | β |
| Hybridization led to a rewired pluripotency network in the allotetraploid <i>Xenopus laevis</i>. | Phelps WA et al. | β | 2023 | β |
| ICF1-Syndrome-Associated <i>DNMT3B</i> Mutations Prevent De Novo Methylation at a Subset of Imprinted Loci during iPSC Reprogramming. | Verma A et al. | β | 2023 | β |
| Identification of a RAD51B enhancer variant for susceptibility and progression to glioma. | Huang L et al. | β | 2023 | β |
| IGF1 and Insulin Receptor Single Nucleotide Variants Associated with Response in HER2-Negative Breast Cancer Patients Treated with Neoadjuvant Chemotherapy with or without a Fasting Mimicking Diet (BOOG 2013-04 DIRECT Trial). | de Gruil N et al. | β | 2023 | β |
| <i>In silico</i> discovery of repetitive elements as key sequence determinants of 3D genome folding. | Gunsalus LM et al. | β | 2023 | β |
| Ikaros is a principal regulator of Aire<sup>+</sup> mTEC homeostasis, thymic mimetic cell diversity, and central tolerance. | Sin JH et al. | β | 2023 | β |
| <i>LADON</i>, a Natural Antisense Transcript of <i>NODAL</i>, Promotes Tumour Progression and Metastasis in Melanoma. | Dutriaux A et al. | β | 2023 | β |
| Increased paternal corticosterone exposure influences offspring behaviour and expression of urinary pheromones. | Hoffmann LB et al. | β | 2023 | β |
| Iron metabolism in autism spectrum disorder; inference through single nucleotide polymorphisms in key iron metabolism genes. | Rabaya S et al. | β | 2023 | β |
| iSMOD: an integrative browser for image-based single-cell multi-omics data. | Zhang W et al. | β | 2023 | β |
| Liquid Biopsy in Alzheimer's Disease Patients Reveals Epigenetic Changes in the <i>PRLHR</i> Gene. | MacΓas M et al. | β | 2023 | β |
| lncRNA Sequencing Reveals Neurodegeneration-Associated FUS Mutations Alter Transcriptional Landscape of iPS Cells That Persists in Motor Neurons. | Provasek VE et al. | β | 2023 | β |
| Long-range repression by ecdysone receptor on complex enhancers of the insulin receptor gene. | Thompson KD et al. | β | 2023 | β |
| Long-range RNA structures in the human transcriptome beyond evolutionarily conserved regions. | Margasyuk S et al. | β | 2023 | β |
| Long read sequencing characterises a novel structural variant, revealing underactive AKR1C1 with overactive AKR1C2 as a possible cause of severe chronic fatigue. | Oakley J et al. | β | 2023 | β |
| MAF amplification licenses ERΞ± through epigenetic remodelling to drive breast cancer metastasis. | Llorente A et al. | β | 2023 | β |
| Massively parallel functional dissection of schizophrenia-associated noncoding genetic variants. | Rummel CK et al. | β | 2023 | β |
| MicroRNA-183 cluster: a promising biomarker and therapeutic target in gastrointestinal malignancies. | Zheng Y et al. | β | 2023 | β |
| MiR-155 Negatively Regulates Anti-Viral Innate Responses among HIV-Infected Progressors. | Pawar P et al. | β | 2023 | β |
| Multiomic analysis implicates FOXO4 in genetic regulation of chick lens fiber cell differentiation. | Brennan L et al. | β | 2023 | β |
| Multiscale genetic architecture of donor-recipient differences reveals intronic LIMS1 mismatches associated with kidney transplant survival. | Sun Z et al. | β | 2023 | β |
| Myeloid leukemia vulnerabilities embedded in long noncoding RNA locus <i>MYNRL15</i>. | Ng M et al. | β | 2023 | β |
| Neonatal <i>AVPR1a</i> Methylation and In-Utero Exposure to Maternal Smoking. | Nidey N et al. | β | 2023 | β |
| NEUROD1 reinforces endocrine cell fate acquisition in pancreatic development. | Bohuslavova R et al. | β | 2023 | β |
| New Challenges for Anatomists in the Era of Omics. | Stabile AM et al. | β | 2023 | β |
| Nucleosome repositioning in chronic lymphocytic leukemia. | Piroeva KV et al. | β | 2023 | β |
| Optical Genome Mapping Reveals the Complex Genetic Landscape of Myeloma. | GiguΓ¨re A et al. | β | 2023 | β |
| Pathogenetic Dichotomy in Angioleiomyoma. | Panagopoulos I et al. | β | 2023 | β |
| Pathogenetic Insights into Developmental Coordination Disorder Reveal Substantial Overlap with Movement Disorders. | Garofalo M et al. | β | 2023 | β |
| Pharmacogenetic Variation in Neanderthals and Denisovans and Implications for Human Health and Response to Medications. | Wroblewski TH et al. | β | 2023 | β |
| PhaseDancer: a novel targeted assembler of segmental duplications unravels the complexity of the human chromosome 2 fusion going from 48 to 46 chromosomes in hominin evolution. | Poszewiecka B et al. | β | 2023 | β |
| Polymorphic short tandem repeats make widespread contributions to blood and serum traits. | Margoliash J et al. | β | 2023 | β |
| Predictors based on cuproptosis closely related to angiogenesis predict colorectal cancer recurrence. | Li H et al. | β | 2023 | β |
| Profibrotic role of transcription factor SP1 in cross-talk between fibroblasts and M2 macrophages. | Feng P et al. | β | 2023 | β |
| Promoter from Chinese hamster elongation factor-1a gene and Epstein-Barr virus terminal repeats concatemer fragment maintain stable high-level expression of recombinant proteins. | Sinegubova MV et al. | β | 2023 | β |
| Quantitative proteomics and RNA-sequencing of mouse liver endothelial cells identify novel regulators of BMP6 by iron. | Fisher AL et al. | β | 2023 | β |
| RANK ligand converts the NCoR/HDAC3 co-repressor to a PGC1Ξ²- and RNA-dependent co-activator of osteoclast gene expression. | Abe Y et al. | β | 2023 | β |
| RAR-related orphan receptor alpha and the staggerer mice: a fine molecular story. | Rani A | β | 2023 | β |
| RBFOX2 regulated EYA3 isoforms partner with SIX4 or ZBTB1 to control transcription during myogenesis. | Wiedner HJ et al. | β | 2023 | β |
| Reprogramming of cis-regulatory networks during skeletal muscle atrophy in male mice. | Lin H et al. | β | 2023 | β |
| Rotate: A command-line program to rotate circular DNA sequences to start at a given position or string. | Durbin R et al. | β | 2023 | β |
| SARS-CoV-2 hijacks a cell damage response, which induces transcription of a more efficient Spike S-acyltransferase. | S Mesquita F et al. | β | 2023 | β |
| Seq2science: an end-to-end workflow for functional genomics analysis. | van der Sande M et al. | β | 2023 | β |
| Severe KIDAR syndrome caused by deletion in the AP1B1 gene: Report of a teenage patient and systematic review of the literature. | Vasconcelos AP et al. | β | 2023 | β |
| Sex-based differences in placental DNA methylation profiles related to gestational age: an NIH ECHO meta-analysis. | Bulka CM et al. | β | 2023 | β |
| SMC3 epigenetic silencing regulates Rab27a expression and drives pancreatic cancer progression. | Bastos N et al. | β | 2023 | β |
| Stage-specific dynamic reorganization of genome topology shapes transcriptional neighborhoods in developing human retinal organoids. | Qu Z et al. | β | 2023 | β |
| Stat5 opposes the transcription factor Tox and rewires exhausted CD8<sup>+</sup> TΒ cells toward durable effector-like states during chronic antigen exposure. | Beltra JC et al. | β | 2023 | β |
| Synchronous T-lymphoblastic lymphoma and neuroblastoma in a 3-yr-old with novel germline <i>SMARCA4</i> and <i>EZH2</i> variants. | Tibout P et al. | β | 2023 | β |
| Targeted inhibition of MASTL kinase activity induces apoptosis in breast cancer. | Misra G et al. | β | 2023 | β |
| TAZ facilitates breast tumor growth by promoting an immune-suppressive tumor microenvironment. | Gershoni A et al. | β | 2023 | β |
| TDP-1 and FUST-1 co-inhibit exon inclusion and control fertility together with transcriptional regulation. | Taylor M et al. | β | 2023 | β |
| Tet2 deletion in CD4+ T cells disrupts Th1 lineage commitment in memory cells and enhances T follicular helper cell recall responses to viral rechallenge. | Baessler A et al. | β | 2023 | β |
| The causal relationship of colorectal cancer on schizophrenia: A Mendelian randomization study. | Kim S et al. | β | 2023 | β |
| The correlates of neonatal complement component 3 and 4 protein concentrations with a focus on psychiatric and autoimmune disorders. | Borbye-Lorenzen N et al. | β | 2023 | β |
| The H2Bub1-deposition complex is required for human and mouse cardiogenesis. | Barish S et al. | β | 2023 | β |
| The Origin of Highly Elevated Cell-Free DNA in Healthy Individuals and Patients with Pancreatic, Colorectal, Lung, or Ovarian Cancer. | Mattox AK et al. | β | 2023 | β |
| Therapeutic effect and transcriptome-methylome characteristics of METTL3 inhibition in liver hepatocellular carcinoma. | Liu Q et al. | β | 2023 | β |
| The transcriptional legacy of developmental stochasticity. | Ballouz S et al. | β | 2023 | β |
| The UHRF1 protein is a key regulator of retrotransposable elements and innate immune response to viral RNA in human cells. | Irwin RE et al. | β | 2023 | β |
| Toll-Like Receptor (<i>TLR</i>) <i>1, 2</i>, and <i>6</i> Gene Polymorphisms Support Evidence of Innate Immune Factors in Schizophrenia. | Sotelo-RamΓrez CE et al. | β | 2023 | β |
| To RNA-binding and beyond: Emerging facets of the role of Rbfox proteins in development and disease. | Mukherjee A et al. | β | 2023 | β |
| Translocator protein is a marker of activated microglia in rodent models but not human neurodegenerative diseases. | Nutma E et al. | β | 2023 | β |
| Whole-genome Comparisons Identify Repeated Regulatory Changes Underlying Convergent Appendage Evolution in Diverse Fish Lineages. | Chen HI et al. | β | 2023 | β |
| ZNF643/ZFP69B Exerts Oncogenic Properties and Associates with Cell Adhesion and Immune Processes. | Oleksiewicz U et al. | β | 2023 | β |
| ZNF714 Supports Pro-Oncogenic Features in Lung Cancer Cells. | Oleksiewicz U et al. | β | 2023 | β |
| Ο<sup>28</sup>-dependent small RNA regulation of flagella biosynthesis. | Melamed S et al. | β | 2023 | β |