Population structure and eigenanalysis.
- Authors
- Patterson, Nick; Price, Alkes L; Reich, David
- Year
- 2006
- Journal
- PLoS genetics
- PMID
- 17194218
- DOI
- 10.1371/journal.pgen.0020190
- PMCID
- PMC1713260
Current methods for inferring population structure from genetic data do not provide formal significance tests for population differentiation. We discuss an approach to studying population structure (principal components analysis) that was first applied to genetic data by Cavalli-Sforza and colleagues. We place the method on a solid statistical footing, using results from modern statistics to develop formal significance tests. We also uncover a general "phase change" phenomenon about the ability to detect structure in genetic data, which emerges from the statistical theory we use, and has an important implication for the ability to discover structure in genetic data: for a fixed but large dataset size, divergence between two populations (as measured, for example, by a statistic like FST) below a threshold is essentially undetectable, but a little above threshold, detection will be easy. This means that we can predict the dataset size needed to detect structure.
The Tracy–Widom DensityConventional percentile points are: P = 0.05, x = .9794; P = 0.01, x = 2.0236; P = 0.001, x = 3.2730.
Testing the Fit of the TW Distribution(A) We carried out 1,000 simulations of a panmictic population, where we have a sample size of m = 100 and n = 5,000 unlinked markers. We give a P–P plot of the TW statistic against the theoretical distribution; this shows the empirical cumulative distribution against the theoretical cumulative distribution for a given quantile. If the fit is good, we expect the plot will lie along the line y = x. Interest is primarily at the top right, corresponding to low p-values.(B) P–P plot corresponding to a sample size of m = 200 and n = 50,000 markers. The fit is again excellent, demonstrating the appropriateness of the Johnstone normalization.
Testing the Fit of the Second EigenvalueWe generated genotype data in which the leading eigenvalue is overwhelmingly significant (FST = .01, m = 100, n = 5,000) with two equal-sized subpopulations. We show P–P plots for the TW statistic computed from the second eigenvalue. The fit at the high end is excellent.
Three African PopulationsPlots of the first two eigenvectors for some African populations in the CEPH–HGDP dataset [30]. Yoruba and Bantu-speaking populations are genetically quite close and were grouped together. The Mandenka are a West African group speaking a language in the Mande family [15, p. 182]. The eigenanalysis fails to find structure in the Bantu populations, but separation between the Bantu and Mandenka with the second eigenvector is apparent.
Three East Asian PopulationsPlots of the first two eigenvectors for a population from Thailand and Chinese and Japanese populations from the International Haplotype Map [32]. The Japanese population is clearly distinguished (though not by either eigenvector separately). The large dispersal of the Thai population, along a line where the Chinese are at an extreme, suggests some gene flow of a Chinese-related population into Thailand. Note the similarity to the simulated data of Figure 8.
The BBP Phase ChangeWe ran a series of simulations, varying the sample size m and number of markers n but keeping the product at mn = 220. Thus the predicted phase change threshold is FST = 2−10. We vary FS and plot the log p-value of the Tracy–Widom statistic. (We clipped −log10 p at 20.) Note that below the threshold there is no statistical significance, while above threshold, we tend to get enormous significance.
Simulation of an Admixed PopulationWe show a simple demography generating an admixed population. Populations A,B,D trifurcated 100 generations ago, while population C is a recent admixture of A and B. Admixture weights for the proportion of population A in population C are Beta-distributed with parameters (3.5,1.5). Effective population sizes are 10,000.
A Plot of a Simulation Involving Admixture (See Main Text for Details)We plot the first two principal components. Population C is a recent admixture of two populations, B and a population not sampled. Note the large dispersion of population C along a line joining the two parental populations. Note the similarity of the simulated data to the real data of Figure 5.
LD Correction with no LD PresentP–P plots of the TW statistic, when no LD is present and after varying levels (k) of our LD correction. We first show this (A) for m = 500, n = 5,000, and then (B) for m = 200, n = 50,000. In both cases the LD correction makes little difference to the fit.
LD Correction with Strong LD(A) Shows P–P plots of the TW statistic (m = 100, n = 5,000) with large blocks of complete LD. Uncorrected, the TW statistic is hopelessly poor, but after correction the fit is again good. Here, we show 1,000 runs with the same data size parameters as in Figure 2A, m = 500, n = 5,000, varying k, the number of columns used to “correct” for LD. The fit is adequate for any nonzero value of k.(B) Shows a similar analysis with m = 200, n = 50,000.
| Name | Type |
|---|---|
| admixed population | cohort |
| admixture LD local | phenotype |
| African | cohort |
| African American | cohort |
| African-American dataset local | cohort |
| allele | cohort |
| allele frequencies local | phenotype |
| ALU insertion polymorphisms local | variant |
| ancestral population local | cohort |
| ancestry | phenotype |
| ANCESTRYMAP local | drug |
| axis of variation local | phenotype |
| B local | drug |
| Bantu local | cohort |
| Bantu cohort local | cohort |
| Bantu Kenya local | cohort |
| Bantu South Africa local | cohort |
| biallelic marker local | variant |
| biallelic single nucleotide polymorphisms (SNPs) local | variant |
| Burunge local | cohort |
| cases | cohort |
| CEPH–HGDP dataset local | cohort |
| CEPH–HGDP panel local | cohort |
| China (Han Chinese) local | cohort |
| Chinese | cohort |
| Chinese population | cohort |
| controls | cohort |
| DNA | drug |
| European ancestry | cohort |
| founding populations local | cohort |
| Fst | phenotype |
| full sample | cohort |
| genetic admixture local | phenotype |
| genetic data local | cohort |
| genetic marker | variant |
| H952 subset local | cohort |
| individuals | cohort |
| individual samples local | cohort |
| International Haplotype Map project | cohort |
| International Hapmap Project | cohort |
| International Human Haplotype Map Project local | cohort |
| Japanese | cohort |
| K populations local | cohort |
| LAPACK local | drug |
| local ancestry local | phenotype |
| Mandenka local | cohort |
| marker | variant |
| markers local | variant |
| Mark Shriver dataset local | cohort |
| Mbuti local | cohort |
| microsatellite | variant |
| microsatellite allele length local | variant |
| microsatellites local | variant |
| micro-titer plates local | drug |
| m individuals local | cohort |
| Nasioi local | cohort |
| Northern Europe population local | cohort |
| Northern Thailand local | cohort |
| outgroup population local | cohort |
| P local | variant |
| parental populations | cohort |
| PCA | drug |
| PCA methods local | drug |
| Population A local | cohort |
| Population B local | cohort |
| Population C local | cohort |
| Population D local | cohort |
| population differentiation | phenotype |
| population i local | cohort |
| population labels local | cohort |
| population structure | phenotype |
| principal eigenvector local | drug |
| root population local | cohort |
| sampled populations local | cohort |
| San local | cohort |
| San individuals local | cohort |
| Shriver and colleagues local | cohort |
| Shriver data local | cohort |
| Shriver et al. dataset local | cohort |
| simulated samples local | cohort |
| Simulation cohort 1 local | cohort |
| Simulation cohort 2 local | cohort |
| single nucleotide polymorphisms | variant |
| SNP | cohort |
| Southern Europe population local | cohort |
| structure local | phenotype |
| Structure | drug |
| subpopulations local | cohort |
| Sub-Saharan Africa dataset local | cohort |
| Thai population local | cohort |
| TW density local | phenotype |
| variant allele local | variant |
| Yoruba | cohort |
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| DAPCy: a Python package for the discriminant analysis of principal components method for population genetic analyses. | Correa Rojo A et al. | — | 2025 | → |
| Deciphering the genetic basis of grain iron and zinc content in wheat under heat and drought stress using GWAS. | Patil SP et al. | — | 2025 | → |
| Decoding past microbial life and antibiotic resistance in İnonü Cave's archaeological soil. | Ozturk S et al. | — | 2025 | → |
| Deep-embedded clustering by relevant scales and genome-wide association study in autism. | Ueno F et al. | — | 2025 | → |
| Demographic history and genetic variation of the Armenian population. | Hovhannisyan A et al. | — | 2025 | → |
| Dense SNP-based analyses complement forensic anthropology biogeographical ancestry assessments. | Mandape SN et al. | — | 2025 | → |
| Determining population structure from k-mer frequencies. | Hrytsenko Y et al. | — | 2025 | → |
| Development of a 5K Liquid-Phase Genome-Wide Breeding Chip for Xinglong Buffalo. | Jiao Y et al. | — | 2025 | → |
| Development of the Comprehensive Addiction Risk Evaluation System: Initial Participant Response to an Online Personalized Feedback Program Integrating Genomic, Behavioral, and Environmental Risk Information. | Dick DM et al. | — | 2025 | → |
| Differentiating the demographic histories and local adaptations of middle-altitude Qiang and Tibetan people. | Sun Q et al. | — | 2025 | → |
| DrFARM: identification of pleiotropic genetic variants in genome-wide association studies. | Chan LS et al. | — | 2025 | → |
| Dynamic history of the Central Plain and Haidai region inferred from Late Neolithic to Iron Age ancient human genomes. | Fang H et al. | — | 2025 | → |
| Dynamic human admixture histories over the past ~1300 years at the northern Himalayan frontier. | Bandyopadhyay E et al. | — | 2025 | → |
| East Asian Gene flow bridged by northern coastal populations over past 6000 years. | Liu J et al. | — | 2025 | → |
| Effect of breed composition in genomic prediction using crossbred pig reference population. | Hong E et al. | — | 2025 | → |
| Effects of polygenic risk for major depressive disorder and childhood emotional neglect on cortical blood flow complexity in young depression patients. | Kang L et al. | — | 2025 | → |
| Enhancing the Potential of Microhaplotypes for Forensic Applications: Insights from Afghan and Somali Populations. | Rodrigues P et al. | — | 2025 | → |
| Epigenetic variation in light of population genetic practice. | Mueller SA et al. | — | 2025 | → |
| Estimating allele frequencies, ancestry proportions and genotype likelihoods in the presence of mapping bias. | Günther T et al. | — | 2025 | → |
| Evaluation of Durum and Hard Red Spring Wheat Panels for Sensitivity to Necrotrophic Effectors Produced by <i>Parastagonospora nodorum</i>. | Szabo-Hever A et al. | — | 2025 | → |
| Evaluation of genetic diversity and selection signals in gayal populations across four countries through whole-genome resequencing. | Liu X et al. | — | 2025 | → |
| Evolutionary Genomics Unravels the Responses and Adaptation to Climate Change in a Key Alpine Forest Tree Species. | Long Z et al. | — | 2025 | → |
| Exploration of Biomarkers of Food Intake in a Caribbean Hispanic Population. | Parnell LD et al. | — | 2025 | → |
| Exploration of hanging coffin customs and the bo people in China through comparative genomics. | Zhou H et al. | — | 2025 | → |
| Female lineages and changing kinship patterns in Neolithic Çatalhöyük. | Yüncü E et al. | — | 2025 | → |
| Fine-scale population structure and widespread conservation of genetic effect sizes between human groups across traits. | Hu S et al. | — | 2025 | → |
| FLT1 and other candidate fetal haemoglobin modifying loci in sickle cell disease in African ancestries. | Wonkam A et al. | — | 2025 | → |
| Functionally enriched human polymorphisms associate to species in the chronic wound microbiome. | Gabrilska RA et al. | — | 2025 | → |
| GCRP: Integrated Global Chicken Reference Panel from 11,951 Chicken Genomes. | Zhu D et al. | — | 2025 | → |
| Gene-Based Burden Testing of Rare Variants in Hemiplegic Migraine: A Computational Approach to Uncover the Genetic Architecture of a Rare Brain Disorder. | Alfayyadh MM et al. | — | 2025 | → |
| Genetic adaptation despite high gene flow in a range-expanding population. | Lee A et al. | — | 2025 | → |
| Genetic analysis of a Yayoi individual from the Doigahama site provides insights into the origins of immigrants to the Japanese Archipelago. | Kim J et al. | — | 2025 | → |
| Genetic Analysis of Recently Discovered Least Chub Populations in the Upper Snake River and Bonneville Drainages. | Billman EJ et al. | — | 2025 | → |
| Genetic Assignment at Different Geographical Levels: A Case Study in a Forest Tree Species (<i>Pinus pinaster</i> Ait.) Using SNP Markers. | Olsson S et al. | — | 2025 | → |
| Genetic basis and origin of coat color in Leiqiong cattle. | Luo FN et al. | — | 2025 | → |
| Genetic differentiation and adaptive evolution of buff-tailed bumblebees in Asia. | Su L et al. | — | 2025 | → |
| Genetic dissection of internode length confers improvement for ideal plant architecture in maize. | Duan H et al. | — | 2025 | → |
| Genetic Diversity of Indigenous Rice Varieties Cultivated by Mon-Khmer-Speaking Ethnic Communities in Thailand. | Sombat C et al. | — | 2025 | → |
| Genetic Formation of Neolithic Hongshan People and Demic Expansion of Hongshan Culture Inferred From Ancient Human Genomes. | Wang R et al. | — | 2025 | → |
| Genetic history of Scythia. | Andreeva TV et al. | — | 2025 | → |
| Genetic insights into CRP levels in Indian adolescents: confirming adult genetic associations. | Nair JM et al. | — | 2025 | → |
| Genetic Origins of the Kiritimati Population from Central-Eastern Micronesia. | Larena M et al. | — | 2025 | → |
| Genetic risk and plasma biomarkers of dementia with Lewy bodies in a Chinese population. | Hao X et al. | — | 2025 | → |
| Genetic stability in the lower Yangtze River basin from Song to Qing Dynasty. | He H et al. | — | 2025 | → |
| Genetic structure and demographic history of house mice in western Europe inferred using whole-genome sequences. | Agwamba K et al. | — | 2025 | → |
| Genetic traceability, conservation effectiveness, and selection signatures analysis based on ancestral information: a case study of Beijing-You chicken. | Kong Y et al. | — | 2025 | → |
| Genetic variation among progeny shapes symbiosis in a basidiomycete with poplar. | Dauphin B et al. | — | 2025 | → |
| Genome Assembly and Winged Fruit Gene Regulation of Chinese Wingnut: Insights from Genomic and Transcriptomic Analyses. | Geng F et al. | — | 2025 | → |
| Genome diversity and signatures of natural selection in mainland Southeast Asia. | He Y et al. | — | 2025 | → |
| Genome-Wide Adaptation to a Complex Environmental Gradient in a Keystone Phytoplankton Species. | Pinseel E et al. | — | 2025 | → |
| Genome-wide analysis of genetic diversity and selection signatures in Fuzhou cattle. | Wang N et al. | — | 2025 | → |
| Genome-wide association study and genome prediction of tallness trait in spinach phenotyping. | Alatawi I et al. | — | 2025 | → |
| Genome-wide association study identifies quantitative trait loci associated with resistance to Verticillium dahliae race 3 in tomato. | Adhikari TB et al. | — | 2025 | → |
| Genome-Wide Association Study Identifying a Novel Gene Related to a History of Febrile Convulsions in Patients With Focal Epilepsy. | Kim J et al. | — | 2025 | → |
| Genome-wide association study of cocoon-producing traits in four Henan silkworm strains revealed new candidate genes. | Song X et al. | — | 2025 | → |
| Genome-wide association study of early-stage non-small cell lung cancer prognosis: a pooled analysis in the International Lung Cancer Consortium. | Dong M et al. | — | 2025 | → |
| Genome-wide association study uncovers a novel gene responsible for rice seedling submergence tolerance. | Lu X et al. | — | 2025 | → |
| Genome-wide local ancestry and the functional consequences of admixture in African and European cattle populations. | McHugo GP et al. | — | 2025 | → |
| Genomic Diversity and Selection Signatures for Zaosheng Cattle. | Xu J et al. | — | 2025 | → |
| Genomic diversity and structure of prehistoric alpine individuals from the Tyrolean Iceman's territory. | Croze M et al. | — | 2025 | → |
| Genomic evidence for the Holocene codispersal of dogs and humans across Eastern Eurasia. | Zhang SJ et al. | — | 2025 | → |
| Genomic formation of lower Yellow River populations in the Han dynasty. | Ji Z et al. | — | 2025 | → |
| Genomic insights from a final Bronze Age community buried in a collective tumulus in an Urnfield settlement in Northeastern Iberia. | Bretos Ezcurra M et al. | — | 2025 | → |
| Genomic insights into the genetic diversity and genetic basis of body height in endangered Chinese Ningqiang ponies. | Han J et al. | — | 2025 | → |
| Genomic insights into the genetic diversity, lateral gaits and high-altitude adaptation of Chakouyi (CKY) horses. | Liu YK et al. | — | 2025 | → |
| Genomic introgression underlies environmental adaptation in three species of Chinese wingnuts, <i>Pterocarya</i>. | Geng 耿方东 F et al. | — | 2025 | → |
| Genomic profiling of a six-generation patrilineal family of the Ming-Qing dynasties in China. | Wang J et al. | — | 2025 | → |
| Genomic reconstruction reveals impact of population management strategies on modern Galápagos dogs. | Spatola GJ et al. | — | 2025 | → |
| Genomic selection and weighted single-step genome-wide association study of sheep body weight and milk yield: Imputing low-coverage sequencing data with similar genetic background panels. | Li D et al. | — | 2025 | → |
| GenoTools: an open-source Python package for efficient genotype data quality control and analysis. | Vitale D et al. | — | 2025 | → |
| Grizzly bear population genomics across a coastal-interior ecotone in British Columbia, Canada. | Henson LH et al. | — | 2025 | → |
| Health and Aging Brain Study-Health Disparities (HABS-HD) methods and partner characteristics. | Petersen ME et al. | — | 2025 | → |
| Heritable Tissue-Specific Gene Expression Associates With Chronic Wound Microbial Species. | Omeir K et al. | — | 2025 | → |
| High continuity of forager ancestry in the Neolithic period of the eastern Maghreb. | Lipson M et al. | — | 2025 | → |
| 'Highly-Informative' Genetic Markers Can Bias Conclusions: Examples and General Solutions. | Lee A et al. | — | 2025 | → |
| HiLand Resource: A Comprehensive Database of Highland Human Populations. | Zhang 张伟杰 W et al. | — | 2025 | → |
| Host-Adaptive Divergence Shapes the Genetic Architecture of <i>Magnaporthe oryzae</i> in Southern China's Rice Agroecosystems. | Liu X et al. | — | 2025 | → |
| Hybridization Drives Trait Integration in Telomere-To-Telomere Apocynum Genomes. | Xu P et al. | — | 2025 | → |
| Identification of blood eQTLs in older adults. | Toyin A et al. | — | 2025 | → |
| Identity-by-Descent Analysis Uncovering a Founder Event in a Novel Hereditary Small Vessel Cerebral Disease. | Maillard A et al. | — | 2025 | → |
| Impact of barriers on Cyrno-Sardinian endemisms: A comparative study of population genetics and phylogeography within taxa of Centranthus sect. Nervosae (Caprifoliaceae). | De Castro O et al. | — | 2025 | → |
| Improved genomic prediction accuracy by genetic relatedness using a crossbred pig population. | Hong E et al. | — | 2025 | → |
| Imputation of ancient canid genomes reveals inbreeding history over the past 10,000 years. | Bougiouri K et al. | — | 2025 | → |
| Individual-based landscape genomics for conservation: An analysis pipeline. | Chambers EA et al. | — | 2025 | → |
| Inferring Domestic Goat Demographic History Through Ancient Genome Imputation. | Erven JAM et al. | — | 2025 | → |
| Inferring past demography and genetic adaptation in Spain using the GCAT cohort. | Garcia-Calleja J et al. | — | 2025 | → |
| Informational rescaling of PCA maps with application to genetic distance. | Taleb NN et al. | — | 2025 | → |
| Integrated genetic and geographic ancestry prediction via large-scale genomic data and machine learning. | Chen J et al. | — | 2025 | → |
| Integrative Genotyping and Analysis of Canine Structural Variation Using Long-read and Short-read Data. | Schall PZ et al. | — | 2025 | → |
| Investigating the demographic history of Sindhi population inhabited in West Coast India. | Kumar L et al. | — | 2025 | → |
| Island ancient genomes reveal dynamic populations interactions in the northern China. | Zhang X et al. | — | 2025 | → |
| k-mer-based GWAS reveals a candidate avirulence gene and structural variation in Puccinia triticina linked to gain of Lr20 virulence. | Tsushima A et al. | — | 2025 | → |
| Landscape genomics analysis reveals the genetic basis underlying cashmere goats and dairy goats adaptation to frigid environments. | Zhao J et al. | — | 2025 | → |
| Largest-Scale Genomic Resource Reconstructing the Genetic Origin, Population Structure, and Biological Adaptations of the Hui People. | He G et al. | — | 2025 | → |
| Late Iron Age and Roman equine breeding north of the Alps: Genetic insights and cultural implications. | Sharif MB et al. | — | 2025 | → |
| Lessons learned: Recommendations for reproducible paleogenomic data analyses. | Souilmi Y et al. | — | 2025 | → |
| Long shared haplotypes identify the southern Urals as a primary source for the 10th-century Hungarians. | Gyuris B et al. | — | 2025 | → |
| <i>Plasmodium simium</i>: birth and evolution of a zoonotic malaria parasite species. | de Albuquerque NRM et al. | — | 2025 | → |
| <i>TMEM14A</i> Gene Affects Hippocampal Sclerosis in Mesial Temporal Lobe Epilepsy. | Kim J et al. | — | 2025 | → |
| Mapping Species Birth Across the Recombination Landscapes of Marine Snails. | Giles EC et al. | — | 2025 | → |
| Mapping the landscape of childhood obesity: genomic insights and socioeconomic status in Indian school-going children. | Nair JM et al. | — | 2025 | → |
| Measuring linkage disequilibrium and improvement of pruning and clumping in structured populations. | Bercovich U et al. | — | 2025 | → |
| Medieval genomes from eastern Iberia illuminate the role of Morisco mass deportations in dismantling a long-standing genetic bridge with North Africa. | Oteo-Garcia G et al. | — | 2025 | → |
| Metabolome genome-wide association analyses identify a splice mutation in AADAT affects lysine degradation in duck skeletal muscle. | Liu D et al. | — | 2025 | → |
| Methodological opportunities in genomic data analysis to advance health equity. | Lehmann B et al. | — | 2025 | → |
| Modeling the European Neolithic expansion suggests predominant within-group mating and limited cultural transmission. | LaPolice TM et al. | — | 2025 | → |
| More than one species of the naked mole-rat, a new biomedical model. | Uhrová M et al. | — | 2025 | → |
| Moroccan genome project: genomic insight into a North African population. | El Fahime E et al. | — | 2025 | → |
| Multi-ancestry genome-wide meta-analysis of 56,241 individuals identifies known and novel cross-population and ancestry-specific associations as novel risk loci for Alzheimer's disease. | Rajabli F et al. | — | 2025 | → |
| Multidisciplinary study of human remains from the 3rd century mass grave in the Roman city of Mursa, Croatia. | Novak M et al. | — | 2025 | → |
| Multi-Experiment and Multi-Locus Genome-Wide Association Mapping for Grain Arsenic in Rice Population. | Chen C et al. | — | 2025 | → |
| Multi-omics integration reveals organ-specific biosynthesis of flavonoids and terpenoids in the medicinal plant <i>Bidens alba</i>. | Wang Z et al. | — | 2025 | → |
| North Pontic crossroads: Mobility in Ukraine from the Bronze Age to the early modern period. | Saag L et al. | — | 2025 | → |
| Novel 4400-year-old ancestral component in a tribe speaking a Dravidian language. | Sequeira JJ et al. | — | 2025 | → |
| Novel genetic associations with childhood adipocytokines in Indian adolescents. | Nair JM et al. | — | 2025 | → |
| Novel insights into sheep domestication in Southwest Asia based on genome-wide sequencing. | Fang W et al. | — | 2025 | → |
| Novel loci for triglyceride/HDL-C ratio longitudinal change among subjects without T2D. | Wang L et al. | — | 2025 | → |
| Optimizing core collections for genetic studies: a worldwide flax germplasm case study. | Gouy M et al. | — | 2025 | → |
| Out-of-Anatolia: Cultural and genetic interactions during the Neolithic expansion in the Aegean. | Koptekin D et al. | — | 2025 | → |
| Pandora: a tool to estimate dimensionality reduction stability of genotype data. | Haag J et al. | — | 2025 | → |
| PANE: fast and reliable ancestral reconstruction on ancient genotype data with non-negative least square and principal component analysis. | de Gennaro L et al. | — | 2025 | → |
| Performance of qpAdm-based screens for genetic admixture on graph-shaped histories and stepping stone landscapes. | Flegontova O et al. | — | 2025 | → |
| Picuris Pueblo oral history and genomics reveal continuity in US Southwest. | Pinotti T et al. | — | 2025 | → |
| Polygenic discrimination of leaf morphotypes in alpine Heldreichia bupleurifolia (Brassicaceae) across its natural range. | Yılmaz E et al. | — | 2025 | → |
| Polygenic predisposition to transdiagnostic symptom dimensions and treatment outcomes across psychiatric disorders. | Abondio P et al. | — | 2025 | → |
| Polygenic risk score for type 2 diabetes shows context-dependent effects across populations. | Guo B et al. | — | 2025 | → |
| Polygenic risk score of glycemic homeostasis, Type 2 Diabetes Mellitus and glycemic components in first episode psychosis. | Segura AG et al. | — | 2025 | → |
| Polygenic Scores and Mood Disorder Onsets in the Context of Family History and Early Psychopathology. | Freeman K et al. | — | 2025 | → |
| PopCluster: A Population Genetics Model-Based Toolset for Simulating, Inferring and Visualising Individual Admixture and Population Structure. | Wang J | — | 2025 | → |
| Population genetic structure of 2 mole species (<i>Mogera imaizumii</i> and <i>M. wogura</i>) in the Japanese Archipelago. | Tsunoi T et al. | — | 2025 | → |
| Population genomic landscapes and insights for conservation of the critically endangered island-endemic Chinese pangolin in Taiwan. | Zhai T et al. | — | 2025 | → |
| Population Genomics Reveals Small-Scale Metapopulation Structure of Two Strictly Aquatic Keystone Species in a Recently Restored Urban River System (Emscher, Germany). | Weiss M et al. | — | 2025 | → |
| Population histories of the Indigenous Adivasi and Sinhalese from Sri Lanka using whole genomes. | Urban Aragon JA et al. | — | 2025 | → |
| Population history and admixture of the Fulani people from the Sahel. | Fortes-Lima CA et al. | — | 2025 | → |
| Population stratification in Northern shrimp (Pandalus borealis) off Iceland evident from RADseq analysis. | Láruson ÁJ et al. | — | 2025 | → |
| Population structure limits the use of genomic data for predicting phenotypes and managing genetic resources in forest trees. | Slavov GT et al. | — | 2025 | → |
| Population structure, selection signal and introgression of gamecocks revealed by whole genome sequencing. | Xu N et al. | — | 2025 | → |
| Postglacial History of a Widespread Wood-Decaying Fungus in Europe Suggests Migration out of Multiple Refugia Followed by Admixture. | Lu DS et al. | — | 2025 | → |
| Power and Limitations of Inferring Genetic Ancestry. | Bird N et al. | — | 2025 | → |
| Prehistoric genomes from Yunnan reveal ancestry related to Tibetans and Austroasiatic speakers. | Wang T et al. | — | 2025 | → |
| Preliminary Insights Into the Relationship Between the Gut Microbiome and Host Genome in Posttraumatic Stress Disorder. | O'Hare MA et al. | — | 2025 | → |
| Proteome-wide association study of prostate cancer risk across populations. | Zhong H et al. | — | 2025 | → |
| randPedPCA: rapid approximation of principal components from large pedigrees. | Lee H et al. | — | 2025 | → |
| Rapid evolution of recombination landscapes during the divergence of cichlid ecotypes in Lake Masoko. | Talbi M et al. | — | 2025 | → |
| Rare predicted loss-of-function and damaging missense variants in CFHR5 associate with protection from age-related macular degeneration. | Holleman AM et al. | — | 2025 | → |
| Recent Adaptation in a Threatened Salmonid Revealed by Museum Genomics. | Sharo AG et al. | — | 2025 | → |
| Refining the genetic structure and admixture history of Hmong-Mien populations. | Yang M et al. | — | 2025 | → |
| Repeatable Genomic Outcomes Along the Speciation Continuum: Insights From Pine Hybrid Zones (Genus Pinus). | Łabiszak B et al. | — | 2025 | → |
| Resolving the Population Structure and Demographic History of the European Anchovy in the Northeast Atlantic: Tracking Historical and Contemporary Environmental Changes. | Pujolar JM et al. | — | 2025 | → |
| Response eQTLs, chromatin accessibility, and 3D chromatin structure in chondrocytes provide mechanistic insight into osteoarthritis risk. | Kramer NE et al. | — | 2025 | → |
| Response splicing quantitative trait loci in primary human chondrocytes identify putative osteoarthritis risk genes. | Byun S et al. | — | 2025 | → |
| scAI-SNP: a method for inferring ancestry from single-cell data. | Hong SC et al. | — | 2025 | → |
| Sequencing Analysis Demonstrates That a Complex Genetic Architecture Contributes to Risk for Spina Bifida. | Strain M et al. | — | 2025 | → |
| Several variants on chromosome 10 are associated with coarse hair diameter in Dazu black goats (Capra hircus). | Zhang J et al. | — | 2025 | → |
| Single-cell transcriptomics reveals the functional trajectories of the endocarp cell clusters in the postharvest fruit senescence process of Hylocereus undatus. | Lv M et al. | — | 2025 | → |
| Single Nucleotide Polymorphisms, Structural Variants, and Short Tandem Repeats Capture Distinct Signals of Adaptive Divergence in the Atlantic Puffin. | Kersten O et al. | — | 2025 | → |
| Slab Grave expansion disrupted long co-existence of distinct Bronze Age herders in central Mongolia. | Lee J et al. | — | 2025 | → |
| SPAmix: a scalable, accurate, and universal analysis framework for large-scale genetic association studies in admixed populations. | Ma Y et al. | — | 2025 | → |
| Sparse haplotype-based fine-scale local ancestry inference at scale reveals recent selection on immune responses. | Yang Y et al. | — | 2025 | → |
| Spawning Asynchrony and Mixed Reproductive Strategies in a Common Mass Spawning Coral. | Ricardo GF et al. | — | 2025 | → |
| Speeding up interval estimation for R2-based mediation effect of high-dimensional mediators via cross-fitting. | Xu Z et al. | — | 2025 | → |
| Striking convergent selection history of wheat and barley and its potential for breeding. | Sow MD et al. | — | 2025 | → |
| Structural Variations Associated with Adaptation and Coat Color in Qinghai-Tibetan Plateau Cattle. | Xia X et al. | — | 2025 | → |
| Survival of the fittest: genomic investigations of the bay scallop reveal a shift in population structure through a summer mortality event. | Grouzdev D et al. | — | 2025 | → |
| Suturing fragmented landscapes: Mosaic hybrid zones in plants may facilitate ecosystem resiliency. | Massatti R et al. | — | 2025 | → |
| Telomere-to-telomere sheep genome assembly identifies variants associated with wool fineness. | Luo LY et al. | — | 2025 | → |
| Testing for differences in polygenic scores in the presence of confounding. | Blanc J et al. | — | 2025 | → |
| That's Not a Hybrid: How to Distinguish Patterns of Admixture and Isolation By Distance. | Wiens BJ et al. | — | 2025 | → |
| The BioSUD Biobank as a genomic resource for substance use disorders in Italy. | Ribatti RM et al. | — | 2025 | → |
| The Consortium for Genomic Diversity, Ancestry, and Health in Colombia (CÓDIGO): building local capacity in genomics and bioinformatics. | Mariño-Ramírez L et al. | — | 2025 | → |
| The contribution of gametic phase disequilibrium to the heritability of complex traits. | Zhang Y et al. | — | 2025 | → |
| The cranium from the Octagon in Ephesos. | Weber GW et al. | — | 2025 | → |
| The demic expansion of Yangshao culture inferred from ancient human genomes. | Sun L et al. | — | 2025 | → |
| The dispersal of domestic cats from North Africa to Europe around 2000 years ago. | De Martino M et al. | — | 2025 | → |
| The genetic footprint of the European Roma diaspora: evidence from the Balkans to the Iberian Peninsula. | Ena GF et al. | — | 2025 | → |
| The genetic history of the Southern Caucasus from the Bronze Age to the Early Middle Ages: 5,000 years of genetic continuity despite high mobility. | Skourtanioti E et al. | — | 2025 | → |
| The genetic origin of the Indo-Europeans. | Lazaridis I et al. | — | 2025 | → |
| The Genetic Variability of Present-Day Bulgarians Captures Ancient and Recent Ancestral Contributions. | Sarno S et al. | — | 2025 | → |
| The genomic history of East Asian Middle Neolithic millet- and rice-agricultural populations. | Xiong J et al. | — | 2025 | → |
| The genomic history of Iberian horses since the last Ice Age. | Lira Garrido J et al. | — | 2025 | → |
| The genomic landscape of short tandem repeats in cattle. | Wang P et al. | — | 2025 | → |
| The genomic legacy of aurochs hybridisation in ancient and modern Iberian cattle. | Günther T et al. | — | 2025 | → |
| The Impact of Ancestry on Genome-Wide Association Studies. | Jones SC et al. | — | 2025 | → |
| The impact of human dispersals and local interactions on the genetic diversity of coastal Papua New Guinea over the past 2,500 years. | Nägele K et al. | — | 2025 | → |
| The impact of the COVID-19 pandemic on alcohol use disorder symptoms: Testing interactions with polygenic risk. | Bountress KE et al. | — | 2025 | → |
| The impacts of European arrival on Australian dingoes. | Scarsbrook L et al. | — | 2025 | → |
| The interplay among space, environment, and gene flow drives genetic differentiation in endemic Baja California Agave sobria subspecies. | Klimova A et al. | — | 2025 | → |
| The <i>SELENOP</i> Polymorphism rs7579 Predicts Hepatic Steatosis in Females With Insulin Resistance in the General Population. | Yamamoto R et al. | — | 2025 | → |
| The mutational landscape and actionable targets of gallbladder cancer: an ancestry-informed and comparative analysis of a Chilean population. | Erices JI et al. | — | 2025 | → |
| The outcasts, the sick, and the undead: atypical burials of the late medieval to modern greater Poland. | Bonczarowska JH et al. | — | 2025 | → |
| The Patterson-Price-Reich's rule of population structure analysis from genetic marker data. | Wang J | — | 2025 | → |
| Tracing Scots Pine Expansion in Europe Using Patterns of Rare Alleles. | Kastally C et al. | — | 2025 | → |
| Tracing social mechanisms and interregional connections in Early Bronze Age Societies in Lower Austria. | Furtwängler A et al. | — | 2025 | → |
| Uncovering the Genetic Structure of the Sekler Population in Transylvania Through Genome-Wide Autosomal Data. | Szabó A et al. | — | 2025 | → |
| Understanding the Past to Preserve the Future: Genomic Insights Into the Conservation Management of a Critically Endangered Waterbird. | Chen Q et al. | — | 2025 | → |
| Unique demographic history and population substructure among the Coorgs of Southern India. | Mukhopadhyay A et al. | — | 2025 | → |
| Unraveling CBS Mutations and Their Clinical Impact in a Chinese Family With Classical Homocystinuria. | Zhang J et al. | — | 2025 | → |
| Unveiling the origins and genetic makeup of the "forgotten people": A study of the Sarmatian-period population in the Carpathian Basin. | Schütz O et al. | — | 2025 | → |
| Using Genome-Wide Association Studies to Reveal DArTseq and SNP Loci Associated with Agronomic Traits and Yield in Maize. | Lenort M et al. | — | 2025 | → |
| Western Hunter-Gatherer genetic ancestry contributes to human longevity in the Italian population. | Sarno S et al. | — | 2025 | → |
| Whole genome and transcriptome analyses in dairy goats identify genetic markers associated with high milk yield. | Zhao J et al. | — | 2025 | → |
| Whole Genome Insights into Genetic Diversity, Introgression, and Adaptation of Hunan Cattle. | Li Y et al. | — | 2025 | → |
| Whole genome insights into genetic diversity, introgression, and adaptation of Yunnan indigenous cattle of Southwestern China. | Guan X et al. | — | 2025 | → |
| Whole-Genome Resequencing Analysis Reveals the Local Ancestry and Selection of Kongshan Cattle. | Bai M et al. | — | 2025 | → |
| Whole-genome resequencing-based assessment of genomic diversity and selection signatures in Rhipicephalus microplus from Shaanxi, China. | Mou YY et al. | — | 2025 | → |
| Whole genome resequencing reveals genetic markers for plumage colour in Jingyuan Chicken. | Yang L et al. | — | 2025 | → |
| Whole-genome resequencing unveils the phylogeographic coevolution of Oncomelania hupensis with Yangtze River dynamics in China. | Duan L et al. | — | 2025 | → |
| Whole-genome sequences provide insights into the formation and adaptation of human populations in the Himalayas. | Arciero E et al. | — | 2025 | → |
| Whole-genome sequences revealed genomic diversity and selection signatures of Dermacentor silvarum in Shaanxi, China. | Mou YY et al. | — | 2025 | → |
| Whole-genome sequencing and variants data of 304 indigenous goats from Southwest China. | Zhang J et al. | — | 2025 | → |
| Whole-Genome Sequencing in Galicia Reveals Male-Biased Pre-Islamic North African Ancestry, Subtle Population Structure, and Microgeographic Patterns of Disease Risk. | Pardo-Seco J et al. | — | 2025 | → |
| Whole-genome sequencing reveals genetic architecture and selection signatures of Kazakh cattle. | Niyazbekova Z et al. | — | 2025 | → |
| Whole methylomes reveal high-altitude-associated methylation at hypoxia and pigmentation genes in South American Indigenous populations. | Pryor Y et al. | — | 2025 | → |
| Wide-scale geographical analysis of genetic ancestry in the South African Coloured population. | Lankheet I et al. | — | 2025 | → |
| X-LDR: an atlas of linkage disequilibrium across species. | Zhu TN et al. | — | 2025 | → |
| 9,000 years of genetic continuity in southernmost Africa demonstrated at Oakhurst rockshelter. | Gretzinger J et al. | — | 2024 | → |
| Accumbal μ-opioid receptors and salt taste-elicited hedonic responses in a rodent model of prenatal adversity, and their correlates using human functional genomics. | Bischoff AR et al. | — | 2024 | → |
| A compendium of genetic variations associated with promoter usage across 49 human tissues. | Yuan J et al. | — | 2024 | → |
| Addition of polygenic risk score to a risk calculator for prediction of breast cancer in US Black women. | Zirpoli GR et al. | — | 2024 | → |
| Adjusting for principal components can induce collider bias in genome-wide association studies. | Grinde KE et al. | — | 2024 | → |
| A genetic variant in the immune-related gene ERAP1 affects colorectal cancer prognosis. | Zou D et al. | — | 2024 | → |
| A High-Coverage Mesolithic Aurochs Genome and Effective Leveraging of Ancient Cattle Genomes Using Whole Genome Imputation. | Erven JAM et al. | — | 2024 | → |
| A map of canine sequence variation relative to a Greenland wolf outgroup. | Nguyen AK et al. | — | 2024 | → |
| Analysis of Gyimes Csango population samples on a high-resolution genome-wide basis. | Bánfai Z et al. | — | 2024 | → |
| Analyzes of pan-genome and resequencing atlas unveil the genetic basis of jujube domestication. | Guo M et al. | — | 2024 | → |
| Anatolian genetic ancestry in North Lebanese populations. | Platt DE et al. | — | 2024 | → |
| A naturally occurring variant of SHLP2 is a protective factor in Parkinson's disease. | Kim SJ et al. | — | 2024 | → |
| Ancestral origins and post-admixture adaptive evolution of highland Tajiks. | Wen J et al. | — | 2024 | → |
| Ancient DNA sheds light on the funerary practices of late Neolithic collective burial in southern France. | Arzelier A et al. | — | 2024 | → |
| Ancient genome of the Chinese Emperor Wu of Northern Zhou. | Du P et al. | — | 2024 | → |
| Ancient genomes from the Tang Dynasty capital reveal the genetic legacy of trans-Eurasian communication at the eastern end of Silk Road. | Lv M et al. | — | 2024 | → |
| Ancient genomes illuminate Eastern Arabian population history and adaptation against malaria. | Martiniano R et al. | — | 2024 | → |
| Ancient genomes revealed the complex human interactions of the ancient western Tibetans. | Bai F et al. | — | 2024 | → |
| Ancient genomes reveal over two thousand years of dingo population structure. | Souilmi Y et al. | — | 2024 | → |
| Ancient Plasmodium genomes shed light on the history of human malaria. | Michel M et al. | — | 2024 | → |
| Ancient Sheep Genomes Reveal Four Millennia of North European Short-Tailed Sheep in the Baltic Sea Region. | Larsson MNA et al. | — | 2024 | → |
| An explanation for the sister repulsion phenomenon in Patterson's f-statistics. | Atağ G et al. | — | 2024 | → |
| An IGHG1 variant exhibits polarized prevalence and confers enhanced IgG1 antibody responses against life-threatening organisms. | Sun W et al. | — | 2024 | → |
| An Improved Chromosome-scale Genome Assembly and Population Genetics resource for Populus tremula. | Robinson KM et al. | — | 2024 | → |
| An individual with Sarmatian-related ancestry in Roman Britain. | Silva M et al. | — | 2024 | → |
| An integrative taxonomy approach reveals Saccharomyces chiloensis sp. nov. as a newly discovered species from Coastal Patagonia. | Peña TA et al. | — | 2024 | → |
| Application of Metabolomics across the Spectrum of Pulmonary and Critical Care Medicine. | Simpson CE et al. | — | 2024 | → |
| Archaeogenetic analysis revealed East Eurasian paternal origin to the Aba royal family of Hungary. | Varga GIB et al. | — | 2024 | → |
| Archaic introgression contributed to shape the adaptive modulation of angiogenesis and cardiovascular traits in human high-altitude populations from the Himalayas. | Ferraretti G et al. | — | 2024 | → |
| A SIMPLE AND FLEXIBLE TEST OF SAMPLE EXCHANGEABILITY WITH APPLICATIONS TO STATISTICAL GENOMICS. | Aw AJ et al. | — | 2024 | → |
| Assessing the impact of post-mortem damage and contamination on imputation performance in ancient DNA. | Garrido Marques A et al. | — | 2024 | → |
| Assessment of genetic structure and trait associations of Watkins wheat landraces under Egyptian field conditions. | Elkot AF et al. | — | 2024 | → |
| A time-resolved multi-omics atlas of transcriptional regulation in response to high-altitude hypoxia across whole-body tissues. | Yan Z et al. | — | 2024 | → |
| A Whole-Genome Scan Revealed Genomic Features and Selection Footprints of Mengshan Cattle. | Cheng H et al. | — | 2024 | → |
| BaTwa populations from Zambia retain ancestry of past hunter-gatherer groups. | Breton G et al. | — | 2024 | → |
| Bioarchaeological Perspectives on Late Antiquity in Dalmatia: Paleogenetic, Dietary, and Population Studies of the Hvar - Radošević burial site. | Zagorc B et al. | — | 2024 | → |
| Biologically Informed Polygenic Scores for Brain Insulin Receptor Network Are Associated with Cardiometabolic Risk Markers and Diabetes in Women. | Selenius JS et al. | — | 2024 | → |
| Brain change trajectories in healthy adults correlate with Alzheimer's related genetic variation and memory decline across life. | Roe JM et al. | — | 2024 | → |
| Bronze age Northern Eurasian genetics in the context of development of metallurgy and Siberian ancestry. | Childebayeva A et al. | — | 2024 | → |
| Changes in expression of VGF, SPECC1L, HLA-DRA and RANBP3L act with APOE E4 to alter risk for late onset Alzheimer's disease. | Branciamore S et al. | — | 2024 | → |
| Chloroplast and whole-genome sequencing shed light on the evolutionary history and phenotypic diversification of peanuts. | Zheng Z et al. | — | 2024 | → |
| Chromosome-level genome and population genomics of the intermediate horseshoe bat ( <i>Rhinolophus affinis)</i> reveal the molecular basis of virus tolerance in <i>Rhinolophus</i> and echolocation call frequency variation. | Zhao L et al. | — | 2024 | → |
| Clinical exome sequencing data from patients with inborn errors of immunity: Cohort level diagnostic yield and the benefit of systematic reanalysis. | Vorsteveld EE et al. | — | 2024 | → |
| Comparative Whole-Genome Analysis of Production Traits and Genetic Structure in Baiyu and Chuanzhong Black Goats. | Luo J et al. | — | 2024 | → |
| Composite dyadic models for spatio-temporal data. | Schwob MR et al. | — | 2024 | → |
| Continental-scale associations of Arabidopsis thaliana phyllosphere members with host genotype and drought. | Karasov TL et al. | — | 2024 | → |
| Corroborating written history with ancient DNA: The case of the Well-man described in an Old Norse <i>saga</i>. | Ellegaard MR et al. | — | 2024 | → |
| Cultural transmission, networks, and clusters among Austronesian-speaking peoples. | Macdonald JC et al. | — | 2024 | → |
| DArTseq-Based, High-Throughput Identification of Novel Molecular Markers for the Detection of Blackleg (<i>Leptosphaeria</i> Spp.) Resistance in Rapeseed. | Starosta E et al. | — | 2024 | → |
| Definition of metafounders based on population structure analysis. | Anglhuber C et al. | — | 2024 | → |
| Deleterious phenotypes in wild Arabidopsis arenosa populations are common and linked to runs of homozygosity. | Barragan AC et al. | — | 2024 | → |
| Demogenomic inference from spatially and temporally heterogeneous samples. | Marchi N et al. | — | 2024 | → |
| Detection of selective sweep in European wild sheep breeds. | Alipanah M et al. | — | 2024 | → |
| Determinants of gastric cancer immune escape identified from non-coding immune-landscape quantitative trait loci. | Miliotis C et al. | — | 2024 | → |
| Development and Assessment of SNP Genotyping Arrays for Citrus and Its Close Relatives. | Hiraoka Y et al. | — | 2024 | → |
| Differentiated adaptative genetic architecture and language-related demographical history in South China inferred from 619 genomes from 56 populations. | Sun Q et al. | — | 2024 | → |
| Differentiated genomic footprints suggest isolation and long-distance migration of Hmong-Mien populations. | He G et al. | — | 2024 | → |
| Distinct patterns of genetic variation at low-recombining genomic regions represent haplotype structure. | Ishigohoka J et al. | — | 2024 | → |
| Distinct positions of genetic and oral histories: Perspectives from India. | Biddanda A et al. | — | 2024 | → |
| Distinguished biological adaptation architecture aggravated population differentiation of Tibeto-Burman-speaking people. | Sun Y et al. | — | 2024 | → |
| Dysregulated energy and protein homeostasis and the loss of GABAergic amacrine cells in aging retina. | Zhou Y et al. | — | 2024 | → |
| Efficacy of federated learning on genomic data: a study on the UK Biobank and the 1000 Genomes Project. | Kolobkov D et al. | — | 2024 | → |
| El Hierro Genome Study: A Genomic and Health Study in an Isolated Canary Island Population. | Puga M et al. | — | 2024 | → |
| Elucidating a genomic signature associated with behavioral and executive function after moderate to severe pediatric TBI: a systems biology informed approach. | Kurowski BG et al. | — | 2024 | → |
| Epigenetic Age Acceleration and Chronological Age: Associations With Cognitive Performance in Daily Life. | Zavala DV et al. | — | 2024 | → |
| Epigenetic changes in sperm are associated with paternal and child quantitative autistic traits in an autism-enriched cohort. | Feinberg JI et al. | — | 2024 | → |
| Evaluation of genotype imputation using Glimpse tools on low coverage ancient DNA. | Çubukcu H et al. | — | 2024 | → |
| Evidence for dynastic succession among early Celtic elites in Central Europe. | Gretzinger J et al. | — | 2024 | → |
| Evolution and Genetic Differentiation of <i>Pleurotus tuoliensis</i> in Xinjiang, China, Based on Population Genomics. | Jia P et al. | — | 2024 | → |
| Evolution of the Correlated Genomic Variation Landscape Across a Divergence Continuum in the Genus Castanopsis. | Chen XY et al. | — | 2024 | → |
| Exome-wide comparative analyses revealed differentiating genomic regions for performance traits in Indian native buffaloes. | Uttam V et al. | — | 2024 | → |
| Exploration of quality variation and stability of hybrid rice under multi-environments. | Chen R et al. | — | 2024 | → |
| Exploring coral speciation: Multiple sympatric <i>Stylophora pistillata</i> taxa along a divergence continuum on the Great Barrier Reef. | Meziere Z et al. | — | 2024 | → |
| Exploring genetic risk for catatonia in a genome wide association study and polygenic risk score analysis. | Wilson JE et al. | — | 2024 | → |
| Exposure to air pollution is associated with DNA methylation changes in sperm. | Schrott R et al. | — | 2024 | → |
| Factors associated with genetic markers for rotator cuff disease in patients with atraumatic rotator cuff tears. | Yanik EL et al. | — | 2024 | → |
| Fast computation of the eigensystem of genomic similarity matrices. | Hahn G et al. | — | 2024 | → |
| Faster model-based estimation of ancestry proportions | Santander CG et al. | — | 2024 | — |
| Five centuries of consanguinity, isolation, health, and conflict in Las Gobas: A Northern Medieval Iberian necropolis. | Rodríguez-Varela R et al. | — | 2024 | → |
| From sub-Saharan Africa to China: Evolutionary history and adaptation of <i>Drosophila melanogaster</i> revealed by population genomics. | Chen J et al. | — | 2024 | → |
| Gelada genomes highlight events of gene flow, hybridisation and local adaptation that track past climatic changes. | Caldon M et al. | — | 2024 | → |
| Genetically Encoded Lizard Color Divergence for Camouflage and Thermoregulation. | Sun BJ et al. | — | 2024 | → |
| Genetic ancestry and diagnostic yield of exome sequencing in a diverse population. | Mavura Y et al. | — | 2024 | → |
| Genetic ancestry in Puerto Rican afro-descendants illustrates diverse histories of African diasporic populations. | Nieves-Colón MA et al. | — | 2024 | → |
| Genetic control of root morphology in response to nitrogen across rapeseed diversity. | Haelterman L et al. | — | 2024 | → |
| Genetic dissection of value-added quality traits and agronomic parameters through genome-wide association mapping in bread wheat (<i>T. aestivum</i> L.). | Vishwakarma MK et al. | — | 2024 | → |
| Genetic diversity of the largest African mole-rat genus, Bathyergus. One, two or four species? | Šumbera R et al. | — | 2024 | → |
| Genetic diversity, population structure and kinship relationships highlight the environmental influence on Uganda's indigenous goat populations. | Nantongo Z et al. | — | 2024 | → |
| Genetic erosion in domesticated barley and a hypothesis of a North African centre of diversity. | Civáň P et al. | — | 2024 | → |
| Genetic evidence for a single founding population of the Lakshadweep Islands. | Kumar S et al. | — | 2024 | → |
| Genetic history and biological adaptive landscape of the Tujia people inferred from shared haplotypes and alleles. | Chen J et al. | — | 2024 | → |
| Genetic Risk For Depression and Quality of Life in Patients With Head and Neck Cancer. | Henry M et al. | — | 2024 | → |
| Genetic, transcriptomic, histological, and biochemical analysis of progressive supranuclear palsy implicates glial activation and novel risk genes. | Farrell K et al. | — | 2024 | → |
| Genome assembly and population genomic data of a pulmonate snail Ellobium chinense. | Kwak H et al. | — | 2024 | → |
| Genome sequencing of 'Fuji' apple clonal varieties reveals genetic mechanism of the spur-type morphology. | Cai Y et al. | — | 2024 | → |
| Genome-wide analyses based on a novel donkey 40K liquid chip reveal the gene responsible for coat color diversity in Chinese Dezhou donkey. | Liu S et al. | — | 2024 | → |
| Genome-wide analyses reveals an association between invasive urothelial carcinoma in the Shetland sheepdog and NIPAL1. | Parker HG et al. | — | 2024 | → |
| Genome-Wide Association Analysis Identifies LILRB2 Gene for Pathological Myopia. | Jiang L et al. | — | 2024 | → |
| Genome-wide association study and development of molecular markers for yield and quality traits in peanut (Arachis hypogaea L.). | Guo M et al. | — | 2024 | → |
| Genome-Wide Association Study Identifies Pharmacogenomic Variants Associated With Metformin Glycemic Response in African American Patients With Type 2 Diabetes. | Wu B et al. | — | 2024 | → |
| Genome-Wide Association Study of Body Weight Traits in Texel and Kazakh Crossbred Sheep. | Wang S et al. | — | 2024 | → |
| Genome-Wide Association Study Points to Novel Locus for Gilles de la Tourette Syndrome. | Tsetsos F et al. | — | 2024 | → |
| Genome-wide exploration of genetic interactions for bladder cancer risk. | Yu EY et al. | — | 2024 | → |
| Genome-wide meta-analysis identifies ancestry-specific loci for Alzheimer's disease. | Ge YJ et al. | — | 2024 | → |
| Genomic adaptation to small population size and saltwater consumption in the critically endangered Cat Ba langur. | Zhang L et al. | — | 2024 | → |
| Genomic analyses correspond with deep persistence of peoples of Blackfoot Confederacy from glacial times. | Rider DF et al. | — | 2024 | → |
| Genomic and Transcriptome Analysis Reveals the Biosynthesis Network of Cordycepin in <i>Cordyceps militaris</i>. | Chai L et al. | — | 2024 | → |
| Genomic characterization of dryland adaptation in endangered Anxi cattle in China. | Lyu Y et al. | — | 2024 | → |
| Genomic dynamics of the Lower Yellow River Valley since the Early Neolithic. | Du P et al. | — | 2024 | → |
| Genomic Evidence for the Complex Evolutionary History of Macaques (Genus Macaca). | Fan Z et al. | — | 2024 | → |
| Genomic insights into the complex demographic history and inbreeding phenomena during Zhou Dynasty on the Central Plains of China. | Wu X et al. | — | 2024 | → |
| Genomic loci involved in sensing environmental cues and metabolism affect seasonal coat shedding in Bos taurus and Bos indicus cattle. | Durbin HJ et al. | — | 2024 | → |
| Genomic Reconstruction of the Successful Establishment of a Feralized Bovine Population on the Subantarctic Island of Amsterdam. | Gautier M et al. | — | 2024 | → |
| Genomics of hybrid parallel origin in Aquilegia ecalcarata. | Geng FD et al. | — | 2024 | → |
| Gliovascular transcriptional perturbations in Alzheimer's disease reveal molecular mechanisms of blood brain barrier dysfunction. | İş Ö et al. | — | 2024 | → |
| Global and Local Ancestry and its Importance: A Review. | Goli RC et al. | — | 2024 | → |
| GWAS for the identification of introgressed candidate genes of <i>Sinapis alba</i> with increased branching numbers in backcross lines of the allohexaploid <i>Brassica</i>. | Singh KP et al. | — | 2024 | → |
| Haplotype-resolved chromosomal-level genome assembly reveals regulatory variations in mulberry fruit anthocyanin content. | Xia Z et al. | — | 2024 | → |
| Harnessing population diversity: in search of tools of the trade. | Bzdok D et al. | — | 2024 | → |
| Hepatic WDR23 proteostasis mediates insulin homeostasis by regulating insulin-degrading enzyme capacity. | Duangjan C et al. | — | 2024 | → |
| High dispersal ability versus migratory traditions: Fine-scale population structure and post-glacial colonisation in bar-tailed godwits. | Conklin JR et al. | — | 2024 | → |
| High levels of consanguinity in a child from Paquimé, Chihuahua, Mexico. | Sedig J et al. | — | 2024 | → |
| High-resolution African HLA resource uncovers HLA-DRB1 expression effects underlying vaccine response. | Mentzer AJ et al. | — | 2024 | → |
| High-throughput DNA sequence analysis elucidates novel insight into the genetic basis of adaptation in local sheep. | Asadollahpour Nanaei H et al. | — | 2024 | → |
| Human DNA from the oldest Eneolithic cemetery in Nalchik points the spread of farming from the Caucasus to the Eastern European steppes. | Zhur KV et al. | — | 2024 | → |
| Human genetic structure in Northwest France provides new insights into West European historical demography. | Alves I et al. | — | 2024 | → |
| Human migration from the Levant and Arabia into Yemen since Last Glacial Maximum. | Henschel A et al. | — | 2024 | → |
| Human whole-exome genotype data for Alzheimer's disease. | Leung YY et al. | — | 2024 | → |
| IBD sharing patterns as intra-breed admixture indicators in small ruminants. | Blondeau Da Silva S et al. | — | 2024 | → |
| Identification of a Branch Number Locus in Soybean Using BSA-Seq and GWAS Approaches. | Dai D et al. | — | 2024 | → |
| Identification of blood metabolites associated with risk of Alzheimer's disease by integrating genomics and metabolomics data. | Liu S et al. | — | 2024 | → |
| Identification of Heilongjiang crossbred beef cattle pedigrees and reveals functional genes related to economic traits based on whole-genome SNP data. | Li S et al. | — | 2024 | → |
| Identification of the 18 World War II executed citizens of Adele, Rethymnon, Crete using an ancient DNA approach and low coverage genomes. | Psonis N et al. | — | 2024 | → |
| Impact of whole-genome duplications on structural variant evolution in Cochlearia. | Hämälä T et al. | — | 2024 | → |
| Independent Prediction of Child Psychiatric Symptoms by Maternal Mental Health and Child Polygenic Risk Scores. | Chen LM et al. | — | 2024 | → |
| Inference of Genetic Diversity, Population Structure, and Selection Signatures in Xiangxi White Buffalo of China Through Whole-Genome Resequencing. | Bian C et al. | — | 2024 | → |
| Inference of selective forces on house mouse genomes during secondary contact in East Asia. | Fujiwara K et al. | — | 2024 | → |
| Inferring ancestry with the hierarchical soft clustering approach tangleGen. | Burger KE et al. | — | 2024 | → |
| Integrating Multiple Database Resources to Elucidate the Gene Flow in Southeast Asian Pig Populations. | Li G et al. | — | 2024 | → |
| Interaction between Continuous Pack-Years Smoked and Polygenic Risk Score on Lung Cancer Risk: Prospective Results from the Framingham Heart Study. | Duncan MS et al. | — | 2024 | → |
| Interpreting population- and family-based genome-wide association studies in the presence of confounding. | Veller C et al. | — | 2024 | → |
| Investigating linguistic and genetic shifts in East Indian tribal groups. | Ahlawat B et al. | — | 2024 | → |
| Kinetochore and ionomic adaptation to whole-genome duplication in Cochlearia shows evolutionary convergence in three autopolyploids. | Bray SM et al. | — | 2024 | → |
| Kinship practices at the early bronze age site of Leubingen in Central Germany. | Penske S et al. | — | 2024 | → |
| Landscape genomics reveals regions associated with adaptive phenotypic and genetic variation in Ethiopian indigenous chickens. | Kebede FG et al. | — | 2024 | → |
| Landscape of genomic structural variations in Indian population-based cohorts: Deeper insights into their prevalence and clinical relevance. | Subramanian K et al. | — | 2024 | → |
| Large-scale genome-wide SNP analysis reveals the rugged (and ragged) landscape of global ancestry, phylogeny, and demographic history in chicken breeds. | Dementieva NV et al. | — | 2024 | → |
| Late Pleistocene onset of mutualistic human/canid (<i>Canis</i> spp.) relationships in subarctic Alaska. | Lanoë F et al. | — | 2024 | → |
| Leveraging ancient DNA to uncover signals of natural selection in Europe lost due to admixture or drift. | Pandey D et al. | — | 2024 | → |
| Limitations of Clustering with PCA and Correlated Noise. | Lippitt W et al. | — | 2024 | → |
| Linking the spatial and genomic structure of adaptive potential for conservation management: a review. | Chhina AK et al. | — | 2024 | → |
| Local Ancestry and Adaptive Introgression in Xiangnan Cattle. | Yan H et al. | — | 2024 | → |
| Local cryptic diversity in salinity adaptation mechanisms in the wild outcrossing <i>Brassica fruticulosa</i>. | Busoms S et al. | — | 2024 | → |
| Long genetic and social isolation in Neanderthals before their extinction. | Slimak L et al. | — | 2024 | → |
| Low Genetic Impact of the Roman Occupation of Britain in Rural Communities. | Scheib CL et al. | — | 2024 | → |
| Malaria resistance-related biological adaptation and complex evolutionary footprints inferred from one integrative Tai-Kadai-related genomic resource. | Duan S et al. | — | 2024 | → |
| Maroon Rice Genomic Diversity Reflects 350 Years of Colonial History. | van de Loosdrecht MS et al. | — | 2024 | → |
| Medieval DNA from Soqotra points to Eurasian origins of an isolated population at the crossroads of Africa and Arabia. | Sirak K et al. | — | 2024 | → |
| Mitochondrial complex I deficiency stratifies idiopathic Parkinson's disease. | Flønes IH et al. | — | 2024 | → |
| Mitochondrial genome insights into the spatio-temporal distribution and genetic diversity of <i>Dendrobium hancockii</i> Rolfe (Orchidaceae). | Hou Z et al. | — | 2024 | → |
| Modifying Effects of Genetic Variations on the Association Between Dietary Isothiocyanate Exposure and Non-muscle Invasive Bladder Cancer Prognosis in the Be-Well Study. | Wang Z et al. | — | 2024 | → |
| Multi-omic Analyses Shed Light on The Genetic Control of High-altitude Adaptation in Sheep. | Li C et al. | — | 2024 | → |
| Multiomics analyses of Jining Grey goat and Boer goat reveal genomic regions associated with fatty acid and amino acid metabolism and muscle development. | Liu Z et al. | — | 2024 | → |
| Multi-proxy bioarchaeological analysis of skeletal remains shows genetic discontinuity in a Medieval Sicilian community. | Monnereau A et al. | — | 2024 | → |
| Neolithic Yersinia pestis infections in humans and a dog. | Susat J et al. | — | 2024 | → |
| Network of large pedigrees reveals social practices of Avar communities. | Gnecchi-Ruscone GA et al. | — | 2024 | → |
| Novel functional insights into ischemic stroke biology provided by the first genome-wide association study of stroke in indigenous Africans. | Akinyemi RO et al. | — | 2024 | → |
| ntsm: an alignment-free, ultra-low-coverage, sequencing technology agnostic, intraspecies sample comparison tool for sample swap detection. | Chu J et al. | — | 2024 | → |
| Origin and dispersal history of Hepatitis B virus in Eastern Eurasia. | Sun B et al. | — | 2024 | → |
| Palaeogenomic insights into the origins of early settlers on the island of Cyprus. | Heraclides A et al. | — | 2024 | → |
| Polygenic Indices (a.k.a. Polygenic Scores) in Social Science: A Guide for Interpretation and Evaluation. | Burt CH | — | 2024 | → |
| Polygenic profiles define aspects of clinical heterogeneity in attention deficit hyperactivity disorder. | LaBianca S et al. | — | 2024 | → |
| Population expansion from central plain to northern coastal China inferred from ancient human genomes. | Wang B et al. | — | 2024 | → |
| Population genetics provides insights into the important agronomic traits of Ganoderma cultivation varieties in China. | Sun L et al. | — | 2024 | → |
| Population genomic evidence of a putative 'far-west' African cryptic taxon in the Anopheles gambiae complex. | Caputo B et al. | — | 2024 | → |
| Population genomics of harbour seal Phoca vitulina from northern British Columbia through California and comparison to the Atlantic subspecies. | Sutherland BJG et al. | — | 2024 | → |
| Population genomics of post-glacial western Eurasia. | Allentoft ME et al. | — | 2024 | → |
| Populations of Latvia and Lithuania in the context of some Indo-European and non-Indo-European speaking populations of Europe and India: insights from genetic structure analysis. | Daniūtė G et al. | — | 2024 | → |
| Positive selection in the genomes of two Papua New Guinean populations at distinct altitude levels. | André M et al. | — | 2024 | → |
| Principled distillation of UK Biobank phenotype data reveals underlying structure in human variation. | Carey CE et al. | — | 2024 | → |
| Principles and methods for transferring polygenic risk scores across global populations. | Kachuri L et al. | — | 2024 | → |
| Protocol for a comprehensive pipeline to study ancient human genomes. | Zhu K et al. | — | 2024 | → |
| QTL mapping of human retina DNA methylation identifies 87 gene-epigenome interactions in age-related macular degeneration. | Advani J et al. | — | 2024 | → |
| Range-wide population genomic structure of the Karner blue butterfly, <i>Plebejus</i> (<i>Lycaeides</i>) <i>samuelis</i>. | Zhang J et al. | — | 2024 | → |
| Recent selection and introgression facilitated high-altitude adaptation in cattle. | Lyu Y et al. | — | 2024 | → |
| Reconstructing the Genetic Relationship between Ancient and Present-Day Siberian Populations. | Gill H et al. | — | 2024 | → |
| Reconstructing the population history of the Nicobarese. | Mishra RK et al. | — | 2024 | → |
| Reticulate evolution and rapid development of reproductive barriers upon secondary contact in a forest fungus. | Lu DS et al. | — | 2024 | → |
| scalepopgen: Bioinformatic Workflow Resources Implemented in Nextflow for Comprehensive Population Genomic Analyses. | Upadhyay M et al. | — | 2024 | → |
| Self-reported neurocognitive complaints in the Swiss HIV Cohort Study: a viral genome-wide association study. | Zeeb M et al. | — | 2024 | → |
| Sexually dimorphic DNA methylation and gene expression patterns in human first trimester placenta. | Gonzalez TL et al. | — | 2024 | → |
| Simplified detection of genetic background admixture using artificial intelligence. | Pauly R et al. | — | 2024 | → |
| Smoking and alcohol by HPV status in head and neck cancer: a Mendelian randomization study. | Thakral A et al. | — | 2024 | → |
| Smoking changes adaptive immunity with persistent effects. | Saint-André V et al. | — | 2024 | → |
| Socio-cultural practices may have affected sex differences in stature in Early Neolithic Europe. | Cox SL et al. | — | 2024 | → |
| Strong Small-Scale Differentiation but No Cryptic Species Within the Two Isopod Species <i>Asellus aquaticus</i> and <i>Proasellus coxalis</i> in a Restored Urban River System (Emscher, Germany). | Weiss M et al. | — | 2024 | → |
| Strongyloides stercoralis genotyping in a human population in southwestern Iran. | Beiromvand M et al. | — | 2024 | → |
| Structural variation in the pangenome of wild and domesticated barley. | Jayakodi M et al. | — | 2024 | → |
| Telomere length and cognitive changes in 7,877 older UK adults of European ancestry. | Packer A et al. | — | 2024 | → |
| Telomere-to-telomere genome assembly of a male goat reveals variants associated with cashmere traits. | Wu H et al. | — | 2024 | → |
| Temporal genomics in Hawaiian crickets reveals compensatory intragenomic coadaptation during adaptive evolution. | Zhang X et al. | — | 2024 | → |
| Testing times: disentangling admixture histories in recent and complex demographies using ancient DNA. | Williams MP et al. | — | 2024 | → |
| The Allen Ancient DNA Resource (AADR) a curated compendium of ancient human genomes. | Mallick S et al. | — | 2024 | → |
| The first complete genome of the extinct European wild ass (Equus hemionus hydruntinus). | Özkan M et al. | — | 2024 | → |
| The genetic admixture and assimilation of Ahom: a historic migrant from Thailand to India. | Kumar S et al. | — | 2024 | → |
| The genetic identity of the Vedda: A language isolate of South Asia. | Welikala A et al. | — | 2024 | → |
| The genetic legacy of the expansion of Bantu-speaking peoples in Africa. | Fortes-Lima CA et al. | — | 2024 | → |
| The genetic origins and impacts of historical Papuan migrations into Wallacea. | Purnomo GA et al. | — | 2024 | → |
| The genome landscape of the Xinglong buffalo. | Chai Y et al. | — | 2024 | → |
| The Genomic and Cultural Diversity of the Inka Qhapaq Hucha Ceremony in Chile and Argentina. | de la Fuente Castro C et al. | — | 2024 | → |
| The genomic history and global migration of a windborne pest. | Hu QL et al. | — | 2024 | → |
| The genomic portrait of the Picene culture provides new insights into the Italic Iron Age and the legacy of the Roman Empire in Central Italy. | Ravasini F et al. | — | 2024 | → |
| The Impact of Recent Demography on Functional Genetic Variation in North African Human Groups. | Lucas-Sánchez M et al. | — | 2024 | → |
| The Once and Future Fish: Assessing a Millennium of Atlantic Herring Exploitation Through Mixed-Stock Analysis and Ancient DNA. | Atmore LM et al. | — | 2024 | → |
| The Population History of Domestic Sheep Revealed by Paleogenomes. | Kaptan D et al. | — | 2024 | → |
| The revelation of genomic breed composition using target capture sequencing: a case of <i>Taxodium</i>. | Han Z et al. | — | 2024 | → |
| The rise and transformation of Bronze Age pastoralists in the Caucasus. | Ghalichi A et al. | — | 2024 | → |
| The role of cognitive reserve and clinical symptoms in the association between genetic liability for educational attainment and functioning in first-episode psychosis: A mediation analysis. | Clougher D et al. | — | 2024 | → |
| The role of emerging elites in the formation and development of communities after the fall of the Roman Empire. | Tian Y et al. | — | 2024 | → |
| Tracing the fine-scale demographic history and recent admixture in Hmong-Mien speakers. | Xia ZY et al. | — | 2024 | → |
| Understanding the genomic heterogeneity of North African Imazighen: from broad to microgeographical perspectives. | Vilà-Valls L et al. | — | 2024 | → |
| Unraveling genomic diversity and positive selection signatures of Qaidam cattle through whole-genome re-sequencing. | Wei X et al. | — | 2024 | → |
| Using NGS Technology and Association Mapping to Identify Candidate Genes Associated with Fusarium Stalk Rot Resistance. | Bocianowski J | — | 2024 | → |
| What one genus of showy moths can say about migration, adaptation, and wing pattern. | Zhang J et al. | — | 2024 | → |
| Whole Genome Analysis Reveals Evolutionary History and Introgression Events in Bale Monkeys. | Seshadri L et al. | — | 2024 | → |
| Whole-genome resequencing deciphers patterns of genetic diversity, phylogeny, and evolutionary dynamics in Kashmir cattle. | Ahmed Z et al. | — | 2024 | → |
| Whole-genome resequencing of Chinese indigenous sheep provides insight into the genetic basis underlying climate adaptation. | Jin M et al. | — | 2024 | → |
| Whole-genome resequencing of Hu sheep identifies candidate genes associated with agronomic traits. | Zhao L et al. | — | 2024 | → |
| Whole-genome resequencing of native and imported dairy goat identifies genes associated with productivity and immunity. | Zhao J et al. | — | 2024 | → |
| Whole-genome resequencing provides insights into the diversity and adaptation to desert environment in Xinjiang Mongolian cattle. | Xu L et al. | — | 2024 | → |
| Whole-Genome Resequencing Reveals Genetic Diversity and Wool Trait-Related Genes in Liangshan Semi-Fine-Wool Sheep. | Sun X et al. | — | 2024 | → |
| Whole-genome resequencing reveals genetic diversity, differentiation, and selection signatures of yak breeds/populations in southwestern China. | Zhang S et al. | — | 2024 | → |
| Whole-genome resequencing uncovers diversity and selective sweep in Kazakh cattle. | Xu L et al. | — | 2024 | → |
| Whole-genome sequencing of the invasive golden apple snail Pomacea canaliculata from Asia reveals rapid expansion and adaptive evolution. | Lu Y et al. | — | 2024 | → |
| Whole-genome sequencing reveals genomic diversity and selection signatures in Xia'nan cattle. | Song X et al. | — | 2024 | → |
| Whole genome sequencing reveals stepping-stone dispersal buffered against founder effects in a range expanding seabird. | Herman RW et al. | — | 2024 | → |
| A 23,000-year-old southern Iberian individual links human groups that lived in Western Europe before and after the Last Glacial Maximum. | Villalba-Mouco V et al. | — | 2023 | → |
| A comparison between similarity matrices for principal component analysis to assess population stratification in sequenced genetic data sets. | Lee S et al. | — | 2023 | → |
| A Comprehensive Genomic Analysis of Chinese Indigenous Ningxiang Pigs: Genomic Breed Compositions, Runs of Homozygosity, and Beyond. | Yin S et al. | — | 2023 | → |
| A deep population reference panel of tandem repeat variation. | Ziaei Jam H et al. | — | 2023 | → |
| Admixture mapping identifies novel Alzheimer's disease risk regions in African Americans. | Rajabli F et al. | — | 2023 | → |
| Advancements and Challenges in Ancient DNA Research: Bridging the Global North-South Divide. | Dalal V et al. | — | 2023 | → |
| A Gene-Acculturation Study of Obesity Among US Hispanic/Latinos: The Hispanic Community Health Study/Study of Latinos. | Fernández-Rhodes L et al. | — | 2023 | → |
| A genetic history of continuity and mobility in the Iron Age central Mediterranean. | Moots HM et al. | — | 2023 | → |
| A genetic history of the Balkans from Roman frontier to Slavic migrations. | Olalde I et al. | — | 2023 | → |
| A Genetic Validation of the Neurodegeneration Biomarkers Tau-A and Tau-C - A Mendelian Randomization Study. | Axelsen TM et al. | — | 2023 | → |
| A Genome-Wide Analysis of a Sudden Cardiac Death Cohort: Identifying Novel Target Variants in the Era of Molecular Autopsy. | Beccacece L et al. | — | 2023 | → |
| A genome-wide scan to identify signatures of selection in Lueyang black -bone chicken. | Xue Z et al. | — | 2023 | → |
| A genomic analysis of the University of Nebraska Replicated Recurrent Selection program. | Lamkey CM et al. | — | 2023 | → |
| A high-resolution haplotype-resolved Reference panel constructed from the China Kadoorie Biobank Study. | Yu C et al. | — | 2023 | → |
| Allelic bias when performing in-solution enrichment of ancient human DNA. | Davidson R et al. | — | 2023 | → |
| A multidisciplinary study on the social customs of the Tang Empire in the Medieval Ages. | Zhao D et al. | — | 2023 | → |
| Analysis of Arabidopsis non-reference accessions reveals high diversity of metabolic gene clusters and discovers new candidate cluster members. | Marszalek-Zenczak M et al. | — | 2023 | → |
| Analysis of genetic diversity and selection signals in Chaling cattle of southern China using whole-genome scan. | Li S et al. | — | 2023 | → |
| Analysis of population structure and genetic diversity in low-variance Saimaa ringed seals using low-coverage whole-genome sequence data. | Olkkonen E et al. | — | 2023 | → |
| Analytical Approaches to Uncover Genetic Associations for Rare Outcomes: Lessons from West Nile Neuroinvasive Disease. | Cahill ME et al. | — | 2023 | → |
| Ancient DNA reveals admixture history and endogamy in the prehistoric Aegean. | Skourtanioti E et al. | — | 2023 | → |
| Ancient DNA reveals genetic admixture in China during tiger evolution. | Sun X et al. | — | 2023 | → |
| Ancient dolphin genomes reveal rapid repeated adaptation to coastal waters. | Louis M et al. | — | 2023 | → |
| Ancient genomes reveal millet farming-related demic diffusion from the Yellow River into southwest China. | Tao L et al. | — | 2023 | → |
| Ancient human DNA recovered from a Palaeolithic pendant. | Essel E et al. | — | 2023 | → |
| Anthropogenic hybridization and its influence on the adaptive potential of the Sardinian wild boar (Sus scrofa meridionalis). | Fabbri G et al. | — | 2023 | → |
| A paleogenome from a Holocene individual supports genetic continuity in Southeast Alaska. | Aqil A et al. | — | 2023 | → |
| A Phylogenetic and Morphological Evolution Study of <i>Ribes</i> L. in China Using RAD-Seq. | Zhang B et al. | — | 2023 | → |
| Application potential of chicken DNA chip in domestic pigeon species - Preliminary results. | Balog K et al. | — | 2023 | → |
| A purebred South American breed showing high effective population size and independent breed ancestry: The Chilean Terrier. | Mujica PC et al. | — | 2023 | → |
| Archaic humans have contributed to large-scale variation in modern human T cell receptor genes. | Corcoran M et al. | — | 2023 | → |
| A Review of Single-Cell RNA-Seq Annotation, Integration, and Cell-Cell Communication. | Cheng C et al. | — | 2023 | → |
| A roadmap to robust discriminant analysis of principal components. | Cullingham C et al. | — | 2023 | → |
| Association Mapping of Resistance to Tan Spot in the Global Durum Panel. | Szabo-Hever A et al. | — | 2023 | → |
| Association of Genetic Variants of HLA-DQA1 with Bullous Pemphigoid Induced by Dipeptidyl Peptidase-4 Inhibitors. | Ozeki T et al. | — | 2023 | → |
| Associations between genetically predicted levels of blood metabolites and pancreatic cancer risk. | Zhong H et al. | — | 2023 | → |
| Bioarchaeological analyses reveal long-lasting continuity at the periphery of the Late Antique Roman Empire. | Depaermentier MLC et al. | — | 2023 | → |
| Brain structure, phenotypic and genetic correlates of reading performance. | Carrión-Castillo A et al. | — | 2023 | → |
| Characterization of Danube Swabian population samples on a high-resolution genome-wide basis. | Bánfai Z et al. | — | 2023 | → |
| Chromosome-level genome assembly and whole-genome resequencing of topmouth culter (Culter alburnus) provide insights into the intraspecific variation of its semi-buoyant and adhesive eggs. | Jiang H et al. | — | 2023 | → |
| Chronological and genetic analysis of an Upper Palaeolithic female infant burial from Borsuka Cave, Poland. | Fewlass H et al. | — | 2023 | → |
| Climate Adaptation and Drift Shape the Genomes of Two Eel-Goby Sister Species Endemic to Contrasting Latitude. | Lü Z et al. | — | 2023 | → |
| Clustering of Juvenile Canavan disease in an Indian community due to population bottleneck and isolation: genomic signatures of a founder event. | Kotambail A et al. | — | 2023 | → |
| Common genetic risk factors in ASD and ADHD co-occurring families. | Zhou A et al. | — | 2023 | → |
| Common genetic variants contribute to heritability of age at onset of schizophrenia. | Sada-Fuente E et al. | — | 2023 | → |
| Community-engaged ancient DNA project reveals diverse origins of 18th-century African descendants in Charleston, South Carolina. | Fleskes RE et al. | — | 2023 | → |
| Comparative Genomic and Transcriptomic Analyses Reveal the Impacts of Genetic Admixture in Kazaks, Uyghurs, and Huis. | Pan Y et al. | — | 2023 | → |
| Confronting historical legacies of biological anthropology in South Africa-Restitution, redress and community-centered science: The Sutherland Nine. | Gibbon VE et al. | — | 2023 | → |
| Convergent changes in melanocortin receptor 1 gene are associated with black-headed coat color in sheep. | Zhou Q et al. | — | 2023 | → |
| correctKin: an optimized method to infer relatedness up to the 4th degree from low-coverage ancient human genomes. | Nyerki E et al. | — | 2023 | → |
| Deep-sequencing of viral genomes from a large and diverse cohort of treatment-naive HIV-infected persons shows associations between intrahost genetic diversity and viral load. | Gabrielaite M et al. | — | 2023 | → |
| Demographic history and genetic structure in pre-Hispanic Central Mexico. | Villa-Islas V et al. | — | 2023 | → |
| Demographic reconstruction of the Western sheep expansion from whole-genome sequences. | Morell Miranda P et al. | — | 2023 | → |
| Dense sampling of ethnic groups within African countries reveals fine-scale genetic structure and extensive historical admixture. | Bird N et al. | — | 2023 | → |
| Design and validation of high-density SNP array of goats and population stratification of Indian goat breeds. | Vijh RK et al. | — | 2023 | → |
| Discovering Loci for Breeding Prospective and Phenology in Wheat Mediterranean Landraces by Environmental and eigenGWAS. | Yannam VRR et al. | — | 2023 | → |
| Early contact between late farming and pastoralist societies in southeastern Europe. | Penske S et al. | — | 2023 | → |
| Efficient estimation for large-scale linkage disequilibrium patterns of the human genome. | Huang X et al. | — | 2023 | → |
| Entwined African and Asian genetic roots of medieval peoples of the Swahili coast. | Brielle ES et al. | — | 2023 | → |
| ERStruct: a fast Python package for inferring the number of top principal components from whole genome sequencing data. | Yang J et al. | — | 2023 | → |
| Estimating human mobility in Holocene Western Eurasia with large-scale ancient genomic data. | Schmid C et al. | — | 2023 | → |
| Estimation of genetic heritabilities of human traits in case-control studies. | Hu D et al. | — | 2023 | → |
| Evaluating the use of statistical and machine learning methods for estimating breed composition of purebred and crossbred animals in thirteen cattle breeds using genomic information. | Ryan CA et al. | — | 2023 | → |
| Evaluation of population structure inferred by principal component analysis or the admixture model. | van Waaij J et al. | — | 2023 | → |
| Evidence of hybridization between genetically distinct Baltic cod stocks during peak population abundance(s). | Helmerson C et al. | — | 2023 | → |
| Examining interactions between polygenic scores and interpersonal trauma exposure on alcohol consumption and use disorder in an ancestrally diverse college cohort. | Sheerin CM et al. | — | 2023 | → |
| Exploration of cannabis use and polygenic risk scores on the psychotic symptom progression of a FEP cohort. | Segura AG et al. | — | 2023 | → |
| Exploring the mechanism of artificial selection signature in Chinese indigenous pigs by leveraging multiple bioinformatics database tools. | Feng X et al. | — | 2023 | → |
| Extensive genetic admixture between Tai-Kadai-speaking people and their neighbours in the northeastern region of the Yungui Plateau inferred from genome-wide variations. | Wang J et al. | — | 2023 | → |
| Extensive pedigrees reveal the social organization of a Neolithic community. | Rivollat M et al. | — | 2023 | → |
| Fast and accurate out-of-core PCA framework for large scale biobank data. | Li Z et al. | — | 2023 | → |
| Fine-scale sampling uncovers the complexity of migrations in 5th-6th century Pannonia. | Vyas DN et al. | — | 2023 | → |
| FixItFelix: improving genomic analysis by fixing reference errors. | Behera S et al. | — | 2023 | → |
| Forensic biogeographical ancestry inference: recent insights and current trends. | Wen Y et al. | — | 2023 | → |
| Functional variants identify sex-specific genes and pathways in Alzheimer's Disease. | Bourquard T et al. | — | 2023 | → |
| Gallbladder Cancer Risk and Indigenous South American Mapuche Ancestry: Instrumental Variable Analysis Using Ancestry-Informative Markers. | Zollner L et al. | — | 2023 | → |
| Genetic admixture and language shift in the medieval Volga-Oka interfluve. | Peltola S et al. | — | 2023 | → |
| Genetic Affinities and Adaptation of the South-West Coast Populations of India. | Kumar L et al. | — | 2023 | → |
| Genetic Ancestry Estimates within Dutch Family Units and Across Genotyping Arrays: Insights from Empirical Analysis Using Two Estimation Methods. | Beck JJ et al. | — | 2023 | → |
| Genetic and cultural adaptations underlie the establishment of dairy pastoralism in the Tibetan Plateau. | Peng MS et al. | — | 2023 | → |
| Genetic and ecological drivers of molt in a migratory bird. | Contina A et al. | — | 2023 | → |
| Genetic and ecophysiological evidence that hybridization facilitated lineage diversification in yellow Camellia (Theaceae) species: a case study of natural hybridization between C. micrantha and C. flavida. | Wei S et al. | — | 2023 | → |
| Genetic continuity and change among the Indigenous peoples of California. | Nakatsuka N et al. | — | 2023 | → |
| Genetic continuity, isolation, and gene flow in Stone Age Central and Eastern Europe. | Mattila TM et al. | — | 2023 | → |
| Genetic differentiation of a southern Africa tepary bean (Phaseolus acutifolius A Gray) germplasm collection using high-density DArTseq SNP markers. | Mwale SE et al. | — | 2023 | → |
| Genetic diversity and historical demography of underutilised goat breeds in North-Western Europe. | Manunza A et al. | — | 2023 | → |
| Genetic diversity and population structure of modern wheat (Triticum aestivum L.) cultivars in Henan Province of China based on SNP markers. | Tang W et al. | — | 2023 | → |
| Genetic diversity and signatures of selection in BoHuai goat revealed by whole-genome sequencing. | Yao Z et al. | — | 2023 | → |
| Genetic features of Sri Lankan elephant, Elephas maximus maximus Linnaeus revealed by high throughput sequencing of mitogenome and ddRAD-seq. | Sooriyabandara MGC et al. | — | 2023 | → |
| Genetic heritage of the Baphuthi highlights an over-ethnicized notion of "Bushman" in the Maloti-Drakensberg, southern Africa. | Daniels RJ et al. | — | 2023 | → |
| Genetic history of East-Central Europe in the first millennium CE. | Stolarek I et al. | — | 2023 | → |
| Genetic identification of members of the prominent Báthory aristocratic family. | Gînguță A et al. | — | 2023 | → |
| Genetic insights into ossification of the posterior longitudinal ligament of the spine. | Koike Y et al. | — | 2023 | → |
| Genetic Origins and Adaptive Evolution of the Deng People on the Tibetan Plateau. | Ge X et al. | — | 2023 | → |
| Genetic population structure of the Xiongnu Empire at imperial and local scales. | Lee J et al. | — | 2023 | → |
| Genetic Risk, Neighborhood Characteristics, and Behavioral Difficulties Among African American Adolescents Living in Very Low-Income Neighborhoods. | Sterrett-Hong EM et al. | — | 2023 | → |
| Genetic swamping of the critically endangered Scottish wildcat was recent and accelerated by disease. | Howard-McCombe J et al. | — | 2023 | → |
| Genetic Variability of Complement Factor H Has Ethnicity-Specific Associations With Choroidal Thickness. | Fenner BJ et al. | — | 2023 | → |
| Genome-environment associations along elevation gradients in two snowbed species of the North-Eastern Calcareous Alps. | Felkel S et al. | — | 2023 | → |
| Genome sequencing reveals the genetic architecture of heterostyly and domestication history of common buckwheat. | Fawcett JA et al. | — | 2023 | → |
| Genome-wide allele and haplotype-sharing patterns suggested one unique Hmong-Mein-related lineage and biological adaptation history in Southwest China. | He G et al. | — | 2023 | → |
| Genome-wide analysis of a collective grave from Mentesh Tepe provides insight into the population structure of early neolithic population in the South Caucasus. | Guarino-Vignon P et al. | — | 2023 | → |
| Genome-wide analysis of a model-derived binge eating disorder phenotype identifies risk loci and implicates iron metabolism. | Burstein D et al. | — | 2023 | → |
| Genome-wide association analysis of tan spot disease resistance in durum wheat accessions from Tunisia. | Laribi M et al. | — | 2023 | → |
| Genome-wide association mapping of resistance to the foliar diseases septoria nodorum blotch and tan spot in a global winter wheat collection. | Peters Haugrud AR et al. | — | 2023 | → |
| Genome-wide association study identifies novel candidate malaria resistance genes in Cameroon. | Esoh KK et al. | — | 2023 | → |
| Genome-wide association study of abnormal elevation of ALT in patients exposed to atabecestat. | Li QS et al. | — | 2023 | → |
| Genome-Wide Association Study of Beta-Blocker Survival Benefit in Black and White Patients with Heart Failure with Reduced Ejection Fraction. | Luzum JA et al. | — | 2023 | → |
| Genome-wide association study of brain biochemical phenotypes reveals distinct genetic architecture of Alzheimer's disease related proteins. | Oatman SR et al. | — | 2023 | → |
| Genome-Wide Association Study of Chronic Dizziness in the Elderly Identifies Loci Implicating MLLT10, BPTF, LINC01224, and ROS1. | Clifford R et al. | — | 2023 | → |
| Genome-wide association study of early liveweight traits in fat-tailed Akkaraman lambs. | Cinar MU et al. | — | 2023 | → |
| Genome-wide association study of population-standardised cognitive performance phenotypes in a rural South African community. | Soo CC et al. | — | 2023 | → |
| Genome-wide association study reveals that the IBSP locus affects ear size in cattle. | Shen J et al. | — | 2023 | → |
| Genome-Wide Association with Uncertainty in the Genetic Similarity Matrix. | Wang S et al. | — | 2023 | → |
| Genome-wide coancestry reveals details of ancient and recent male-driven reticulation in baboons. | Sørensen EF et al. | — | 2023 | → |
| Genome-wide meta-analysis identifies new candidate genes for sickle cell disease nephropathy. | Garrett ME et al. | — | 2023 | → |
| Genome-wide polygenic risk score for major osteoporotic fractures in postmenopausal women using associated single nucleotide polymorphisms. | Wu Q et al. | — | 2023 | → |
| Genome-wide study of longitudinal brain imaging measures of multiple sclerosis progression across six clinical trials. | Loomis SJ et al. | — | 2023 | → |
| Genome-wide variation in the Angolan Namib Desert reveals unique pre-Bantu ancestry. | Oliveira S et al. | — | 2023 | → |
| Genomic adaptation to extreme climate conditions in beef cattle as a consequence of cross-breeding program. | Tian R et al. | — | 2023 | → |
| Genomic analyses of hair from Ludwig van Beethoven. | Begg TJA et al. | — | 2023 | → |
| Genomic analysis of indigenous goats in Southwest Asia reveals evidence of ancient adaptive introgression related to desert climate. | Asadollahpour Nanaei H et al. | — | 2023 | → |
| Genomic analysis of the rhesus macaque (<i>Macaca mulatta</i>) and the cynomolgus macaque (<i>Macaca fascicularis</i>) uncover polygenic signatures of reinforcement speciation. | Bailey N et al. | — | 2023 | → |
| Genomic analysis of two phlebotomine sand fly vectors of Leishmania from the New and Old World. | Labbé F et al. | — | 2023 | → |
| Genomic analysis reveals a KIT-related chromosomal translocation associated with the white coat phenotype in yak. | Zhang F et al. | — | 2023 | → |
| Genomic analysis unveils reduced genetic variability but increased proportion of heterozygotic genotypes of the intensively managed mezcal agave, Agave angustifolia. | Klimova A et al. | — | 2023 | → |
| Genomic and evolutionary relationships among wild and cultivated blueberry species. | Manzanero BR et al. | — | 2023 | → |
| Genomic divergence and introgression among three Populus species. | Zhang H et al. | — | 2023 | → |
| Genomic divergence between two sister Medicago species triggered by the quaternary climatic oscillations on the Qinghai-Tibet plateau and northern China. | Guo W et al. | — | 2023 | → |
| Genomic diversity and differentiation between island and mainland populations of white-tailed eagles (Haliaeetus albicilla). | Hansen CCR et al. | — | 2023 | → |
| Genomic diversity of wild and cultured Yesso scallop Mizuhopecten yessoensis from Japan and Canada. | Sutherland BJG et al. | — | 2023 | → |
| Genomic evidence for adaptation to tuberculosis in the Andes before European contact. | Joseph SK et al. | — | 2023 | → |
| Genomic formation of Tibeto-Burman speaking populations in Guizhou, Southwest China. | Chen J et al. | — | 2023 | → |
| Genomic history of coastal societies from eastern South America. | Ferraz T et al. | — | 2023 | → |
| Genomic Insights into the Population History of the Resande or Swedish Travelers. | Vilà-Valls L et al. | — | 2023 | → |
| Genomic Landscape of Copy Number Variations and Their Associations with Climatic Variables in the World's Sheep. | Salehian-Dehkordi H et al. | — | 2023 | → |
| Genomic portrait and relatedness patterns of the Iron Age Log Coffin culture in northwestern Thailand. | Carlhoff S et al. | — | 2023 | → |
| Genomic variation in the genus Beta based on 656 sequenced beet genomes. | Felkel S et al. | — | 2023 | → |
| Getting it right: Teaching undergraduate biology to undermine racial essentialism. | Guevara E et al. | — | 2023 | → |
| Global genetic diversity, introgression, and evolutionary adaptation of indicine cattle revealed by whole genome sequencing. | Chen N et al. | — | 2023 | → |
| GWAS for Early-Establishment QTLs and Their Linkage to Major Phenology-Affecting Genes (<i>Vrn</i>, <i>Ppd,</i> and <i>Eps</i>) in Bread Wheat. | Farhad M et al. | — | 2023 | → |
| High-coverage genome of the Tyrolean Iceman reveals unusually high Anatolian farmer ancestry. | Wang K et al. | — | 2023 | → |
| High-quality read-based phasing of cystic fibrosis cohort informs genetic understanding of disease modification. | Mastromatteo S et al. | — | 2023 | → |
| How Physical and Molecular Anthropology Interplay in the Creation of Biological Profiles of Unidentified Migrants. | Pilli E et al. | — | 2023 | → |
| Human genetic history on the Tibetan Plateau in the past 5100 years. | Wang H et al. | — | 2023 | → |
| Hybridization and adaptive introgression in a marine invasive species in native habitats. | Pujolar JM et al. | — | 2023 | → |
| Hybridization of Atlantic puffins in the Arctic coincides with 20th-century climate change. | Kersten O et al. | — | 2023 | → |
| Hybrid origin of a primate, the gray snub-nosed monkey. | Wu H et al. | — | 2023 | → |
| Identifying genetic loci that are associated with changes in gene expression in PTSD in a South African cohort. | Swart PC et al. | — | 2023 | → |
| Identifying genetic variation associated with environmental gradients and drought-tolerance phenotypes in ponderosa pine. | Shu M et al. | — | 2023 | → |
| Identifying signatures of positive selection in human populations from North Africa. | Caro-Consuegra R et al. | — | 2023 | → |
| Identifying the genetic basis of viral spillover using Lassa virus as a test case. | Whitlock AOB et al. | — | 2023 | → |
| Imputed genomes of historical horses provide insights into modern breeding. | Todd ET et al. | — | 2023 | → |
| Indigenous Australian genomes show deep structure and rich novel variation. | Silcocks M et al. | — | 2023 | → |
| Inference of Admixture Origins in Indigenous African Cattle. | Kim K et al. | — | 2023 | → |
| Inferring biological kinship in ancient datasets: comparing the response of ancient DNA-specific software packages to low coverage data. | Marsh WA et al. | — | 2023 | → |
| Inferring the population history of Kyrgyz in Xinjiang, Northwest China from genome-wide array genotyping. | Halili B et al. | — | 2023 | → |
| Influence of alcohol consumption and alcohol metabolism variants on breast cancer risk among Black women: results from the AMBER consortium. | Young KL et al. | — | 2023 | → |
| Insights into the genetic histories and lifeways of Machu Picchu's occupants. | Salazar L et al. | — | 2023 | → |
| Interactions between genes involved in physiological dysregulation and axon guidance: role in Alzheimer's disease. | Arbeev KG et al. | — | 2023 | → |
| Interpreting mismatches between linguistic and genetic patterns among speakers of Tanimuka (Eastern Tukanoan) and Yukuna (Arawakan). | Arias L et al. | — | 2023 | → |
| Introgression between highly divergent fungal sister species. | Kinneberg VB et al. | — | 2023 | → |
| Investigation of phylogenetic relationships within <i>Saxifraga diversifolia</i> complex (Saxifragaceae) based on restriction-site associated DNA sequence markers. | Yuan R et al. | — | 2023 | → |
| Isotopic and DNA analyses reveal multiscale PPNB mobility and migration across Southeastern Anatolia and the Southern Levant. | Wang X et al. | — | 2023 | → |
| Landscape genomics reveals adaptive genetic differentiation driven by multiple environmental variables in naked barley on the Qinghai-Tibetan Plateau. | Chen T et al. | — | 2023 | → |
| Limitations of principal components in quantitative genetic association models for human studies. | Yao Y et al. | — | 2023 | → |
| Limited evidence of a shared genetic relationship between C-reactive protein levels and cognitive function in older UK adults of European ancestry. | Packer A et al. | — | 2023 | → |
| Limited historical admixture between European wildcats and domestic cats. | Jamieson A et al. | — | 2023 | → |
| Long divergent haplotypes introgressed from wild sheep are associated with distinct morphological and adaptive characteristics in domestic sheep. | Cheng H et al. | — | 2023 | → |
| MATS: a novel multi-ancestry transcriptome-wide association study to account for heterogeneity in the effects of cis-regulated gene expression on complex traits. | Knutson KA et al. | — | 2023 | → |
| Melancholic features and typical neurovegetative symptoms of major depressive disorder show specific polygenic patterns. | Oliva V et al. | — | 2023 | → |
| Metabolome-Based Genome-Wide Association Study of Duck Meat Leads to Novel Genetic and Biochemical Insights. | Liu D et al. | — | 2023 | → |
| Methods for Assessing Population Relationships and History Using Genomic Data. | Moorjani P et al. | — | 2023 | → |
| Microbiome composition is shaped by geography and population structure in the parasitic wasp Asobara japonica, but not in the presence of the endosymbiont Wolbachia. | Brinker P et al. | — | 2023 | → |
| Middle Holocene Siberian genomes reveal highly connected gene pools throughout North Asia. | Wang K et al. | — | 2023 | → |
| Molecular genetics and quantitative traits divergence among populations of <i>Eothenomys miletus</i> from Hengduan Mountain region. | Ren Y et al. | — | 2023 | → |
| mTOR pathway candidate genes and energy intake interaction on breast cancer risk in Black women from the Women's Circle of Health Study. | Ilozumba MN et al. | — | 2023 | → |
| mTOR pathway candidate genes and obesity interaction on breast cancer risk in black women from the Women's Circle of Health Study. | Ilozumba MN et al. | — | 2023 | → |
| mTOR pathway candidate genes and physical activity interaction on breast cancer risk in black women from the women's circle of health study. | Ilozumba MN et al. | — | 2023 | → |
| Nanopore-based direct sequencing of RNA transcripts with 10 different modified nucleotides reveals gaps in existing technology. | Burdick JT et al. | — | 2023 | → |
| Native American ancestry and breast cancer risk in Colombian and Mexican women: ruling out potential confounding through ancestry-informative markers. | Zollner L et al. | — | 2023 | → |
| Natural clines and human management impact the genetic structure of Algerian honey bee populations. | Salvatore G et al. | — | 2023 | → |
| Neural ADMIXTURE for rapid genomic clustering. | Mantes AD et al. | — | 2023 | → |
| Northwest African Neolithic initiated by migrants from Iberia and Levant. | Simões LG et al. | — | 2023 | → |
| Palaeogenomics of Upper Palaeolithic to Neolithic European hunter-gatherers. | Posth C et al. | — | 2023 | → |
| Pan-genome and transcriptome analyses provide insights into genomic variation and differential gene expression profiles related to disease resistance and fatty acid biosynthesis in eastern black walnut (<i>Juglans nigra</i>). | Zhou H et al. | — | 2023 | → |
| Parity is associated with long-term differences in DNA methylation at genes related to neural plasticity in multiple sclerosis. | Campagna MP et al. | — | 2023 | → |
| Patrilocality and hunter-gatherer-related ancestry of populations in East-Central Europe during the Middle Bronze Age. | Chyleński M et al. | — | 2023 | → |
| Performance of SNP barcodes to determine genetic diversity and population structure of <i>Plasmodium falciparum</i> in Africa. | Argyropoulos DC et al. | — | 2023 | → |
| Phylogenomic investigation of safflower (Carthamus tinctorius) and related species using genotyping-by-sequencing (GBS). | Sardouei-Nasab S et al. | — | 2023 | → |
| Phylogenomics Reveals High Levels of Incomplete Lineage Sorting at the Ancestral Nodes of the Macaque Radiation. | Tan X et al. | — | 2023 | → |
| Polymorphic short tandem repeats make widespread contributions to blood and serum traits. | Margoliash J et al. | — | 2023 | → |
| Population evolution of seagrasses returning to the ocean. | Yan W et al. | — | 2023 | → |
| Population genomics of American mink using genotype data. | Hu G et al. | — | 2023 | → |
| Population history modulates the fitness effects of Copy Number Variation in the Roma. | Antinucci M et al. | — | 2023 | → |
| Population stratification correction using Bayesian shrinkage priors for genetic association studies. | Liu Z et al. | — | 2023 | → |
| Predicted leukocyte telomere length and risk of myeloid neoplasms. | Sullivan SM et al. | — | 2023 | → |
| Predictive network analysis identifies JMJD6 and other potential key drivers in Alzheimer's disease. | Merchant JP et al. | — | 2023 | → |
| Privacy preserving identification of population stratification for collaborative genomic research. | Dervishi L et al. | — | 2023 | → |
| Proof-of-concept recall-by-genotype study of extremely low and high Alzheimer's polygenic risk reveals autobiographical deficits and cingulate cortex correlates. | Lancaster T et al. | — | 2023 | → |
| QTL and PACE analyses identify candidate genes for anthracnose resistance in tomato. | Lopez-Ortiz C et al. | — | 2023 | → |
| Quantitative thresholds for variant enrichment in 13,845 cases: improving pathogenicity classification in genetic hearing loss. | Liu S et al. | — | 2023 | → |
| Reconstructing the population history of the Sinhalese, the major ethnic group in Śrī Laṅkā. | Singh PP et al. | — | 2023 | → |
| Regulation at Drosophila's Malic Enzyme highlights the complexity of transvection and its sensitivity to genetic background. | Rzezniczak TZ et al. | — | 2023 | → |
| Re-sequencing and morphological data revealed the genetics of stone shell and kernel traits in apricot. | Zhang Q et al. | — | 2023 | → |
| Risk assessment for colorectal cancer via polygenic risk score and lifestyle exposure: a large-scale association study of East Asian and European populations. | Xin J et al. | — | 2023 | → |
| Saddlepoint approximations to score test statistics in logistic regression for analyzing genome-wide association studies. | Johnsen PV et al. | — | 2023 | → |
| Serotonin transporter (5-HTT) gene network moderates the impact of prenatal maternal adversity on orbitofrontal cortical thickness in middle childhood. | Sunderji A et al. | — | 2023 | → |
| Spatial and temporal heterogeneity in human mobility patterns in Holocene Southwest Asia and the East Mediterranean. | Koptekin D et al. | — | 2023 | → |
| Spatiotemporal fluctuations of population structure in the Americas revealed by a meta-analysis of the first decade of archaeogenomes. | Dos Santos ALC et al. | — | 2023 | → |
| Strategies for the Genomic Analysis of Admixed Populations. | Tan T et al. | — | 2023 | → |
| Structural variation and introgression from wild populations in East Asian cattle genomes confer adaptation to local environment. | Xia X et al. | — | 2023 | → |
| Structure-informed clustering for population stratification in association studies. | Bose A et al. | — | 2023 | → |
| Subgenomic Stability of Progenitor Genomes During Repeated Allotetraploid Origins of the Same Grass Brachypodium hybridum. | Mu W et al. | — | 2023 | → |
| SuSiE PCA: A scalable Bayesian variable selection technique for principal component analysis. | Yuan D et al. | — | 2023 | → |
| Targeted sequencing of high-density SNPs provides an enhanced tool for forensic applications and genetic landscape exploration in Chinese Korean ethnic group. | Lan Q et al. | — | 2023 | → |
| The ancestry and geographical origins of St Helena's liberated Africans. | Sandoval-Velasco M et al. | — | 2023 | → |
| The genetic and evolutionary basis of gene expression variation in East Africans. | Kelly DE et al. | — | 2023 | → |
| The genetic architecture of prolificacy in maize revealed by association mapping and bulk segregant analysis. | Duan H et al. | — | 2023 | → |
| The genetic determinants of recurrent somatic mutations in 43,693 blood genomes. | Weinstock JS et al. | — | 2023 | → |
| The genetic history of Scandinavia from the Roman Iron Age to the present. | Rodríguez-Varela R et al. | — | 2023 | → |
| The genetic legacy of African Americans from Catoctin Furnace. | Harney É et al. | — | 2023 | → |
| The genetic structure and admixture of Manchus and Koreans in northeast China. | Sun N et al. | — | 2023 | → |
| The genomic analysis of current-day North African populations reveals the existence of trans-Saharan migrations with different origins and dates. | Lucas-Sánchez M et al. | — | 2023 | → |
| The genomic diversity of Taiwanese Austronesian groups: Implications for the "Into- and Out-of-Taiwan" models. | Liu D et al. | — | 2023 | → |
| The genomic echoes of the last Green Sahara on the Fulani and Sahelian people. | D'Atanasio E et al. | — | 2023 | → |
| The impact of similarity metrics on cell-type clustering in highly multiplexed in situ imaging cytometry data. | Willie E et al. | — | 2023 | → |
| The influence of gender and wealth inequality on Alzheimer's disease among the elderly: A global study. | Yu S et al. | — | 2023 | → |
| The making of the oral microbiome in Agta hunter-gatherers. | Dobon B et al. | — | 2023 | → |
| The time and place of origin of South Caucasian languages: insights into past human societies, ecosystems and human population genetics. | Gavashelishvili A et al. | — | 2023 | → |
| Tracing the geographic origin of endangered plant species using transcriptome-derived SNPs: An example of Cathaya argyrophylla. | Sun JJ et al. | — | 2023 | → |
| Unraveling the mitochondrial phylogenetic landscape of Thailand reveals complex admixture and demographic dynamics. | Jaisamut K et al. | — | 2023 | → |
| Using GWAS summary data to impute traits for genotyped individuals. | Ren J et al. | — | 2023 | → |
| Variants in <i>JAZF1</i> are associated with asthma, type 2 diabetes, and height in the United Kingdom biobank population. | DeWan AT et al. | — | 2023 | → |
| Whole-body adipose tissue multi-omic analyses in sheep reveal molecular mechanisms underlying local adaptation to extreme environments. | Xu YX et al. | — | 2023 | → |
| Whole Genome Analysis of Venous Thromboembolism: the Trans-Omics for Precision Medicine Program. | Seyerle AA et al. | — | 2023 | → |
| Whole-genome resequencing reveals the genomic diversity and signatures of selection in Romanov sheep. | Cao C et al. | — | 2023 | → |
| Whole-genome sequencing reveals a complex African population demographic history and signatures of local adaptation. | Fan S et al. | — | 2023 | → |
| Whole genome sequencing reveals population diversity and variation in HIV-1 specific host genes. | Thami PK et al. | — | 2023 | → |
| Whole genomes from Angola and Mozambique inform about the origins and dispersals of major African migrations. | Tallman S et al. | — | 2023 | → |
| 4000-year-old hair from the Middle Nile highlights unusual ancient DNA degradation pattern and a potential source of early eastern Africa pastoralists. | Wang K et al. | — | 2022 | → |
| Accurate modeling of replication rates in genome-wide association studies by accounting for Winner's Curse and study-specific heterogeneity. | Zou J et al. | — | 2022 | → |
| Admixture has obscured signals of historical hard sweeps in humans. | Souilmi Y et al. | — | 2022 | → |
| A genome-wide association study for rheumatoid arthritis replicates previous HLA and non-HLA associations in a cohort from South Africa. | Mathebula EM et al. | — | 2022 | → |
| A genomic snapshot of demographic and cultural dynamism in Upper Mesopotamia during the Neolithic Transition. | Altınışık NE et al. | — | 2022 | → |
| Analysis of genetic diversity and selection characteristics using the whole genome sequencing data of five buffaloes, including Xilin buffalo, in Guangxi, China. | Chen Z et al. | — | 2022 | → |
| Ancient DNA from Protohistoric Period Cambodia indicates that South Asians admixed with local populations as early as 1st-3rd centuries CE. | Changmai P et al. | — | 2022 | → |
| Ancient DNA from Tubo Kingdom-related tombs in northeastern Tibetan Plateau revealed their genetic affinity to both Tibeto-Burman and Altaic populations. | Yu XE et al. | — | 2022 | → |
| Arctic introgression and chromatin regulation facilitated rapid Qinghai-Tibet Plateau colonization by an avian predator. | Hu L et al. | — | 2022 | → |
| Asymmetrical lineage introgression and recombination in populations of Aspergillus flavus: Implications for biological control. | Molo MS et al. | — | 2022 | → |
| BMI-CNV: a Bayesian framework for multiple genotyping platforms detection of copy number variants. | Luo X et al. | — | 2022 | → |
| Breaking the reproductive barrier of divergent species to explore the genomic landscape. | Gilles A et al. | — | 2022 | → |
| Characterization of Arabian Peninsula whole exomes: Contributing to the catalogue of human diversity. | Ferreira JC et al. | — | 2022 | → |
| Circulating Soluble CD163, Associations With Cardiovascular Outcomes and Mortality, and Identification of Genetic Variants in Older Individuals: The Cardiovascular Health Study. | Durda P et al. | — | 2022 | → |
| Comparative Analysis of Molecular RFLP and SNP Markers in Assessing and Understanding the Genetic Diversity of Various Chicken Breeds. | Dementieva NV et al. | — | 2022 | → |
| Counter the weaponization of genetics research by extremists. | Carlson J et al. | — | 2022 | → |
| Cultural and demic co-diffusion of Tubo Empire on Tibetan Plateau. | Zhu K et al. | — | 2022 | → |
| Demographic and Selection Histories of Populations Across the Sahel/Savannah Belt. | Fortes-Lima C et al. | — | 2022 | → |
| Dissecting the loci underlying maturation timing in Atlantic salmon using haplotype and multi-SNP based association methods. | Sinclair-Waters M et al. | — | 2022 | → |
| Diversity and metabolic potentials of microbial communities associated with pollinator and cheater fig wasps in fig-fig wasp mutualism system. | Dong Y et al. | — | 2022 | → |
| Domestication and selection footprints in Persian walnuts (Juglans regia). | Luo X et al. | — | 2022 | → |
| Dual ancestries and ecologies of the Late Glacial Palaeolithic in Britain. | Charlton S et al. | — | 2022 | → |
| Genetic insights into smoking behaviours in 10,558 men of African ancestry from continental Africa and the UK. | Piga NN et al. | — | 2022 | → |
| Genetics of randomly bred cats support the cradle of cat domestication being in the Near East. | Nilson SM et al. | — | 2022 | → |
| Genome resequencing reveals independent domestication and breeding improvement of naked oat. | Nan J et al. | — | 2022 | → |
| Genome-wide association studies reveal genetic basis of ionomic variation in cassava. | Yin H et al. | — | 2022 | → |
| Genome-wide data from medieval German Jews show that the Ashkenazi founder event pre-dated the 14<sup>th</sup> century. | Waldman S et al. | — | 2022 | → |
| Genome-wide identification of SNPs associated with body weight in yak. | Jiang H et al. | — | 2022 | → |
| Genomic divergence, local adaptation, and complex demographic history may inform management of a popular sportfish species complex. | Gunn JC et al. | — | 2022 | → |
| Genomic evidence for ancient human migration routes along South America's Atlantic coast. | Campelo Dos Santos AL et al. | — | 2022 | → |
| Genomic insights into the genetic structure and population history of Mongolians in Liaoning Province. | Hou X et al. | — | 2022 | → |
| Genomic Signatures Reveal Breeding Effects of Lulai Pigs. | Cao R et al. | — | 2022 | → |
| Genomics, Origin and Selection Signals of Loudi Cattle in Central Hunan. | Jin L et al. | — | 2022 | → |
| Identification of shared and differentiating genetic architecture for autism spectrum disorder, attention-deficit hyperactivity disorder and case subgroups. | Mattheisen M et al. | — | 2022 | → |
| Inference of gene-environment interaction from heterogeneous case-parent trios. | Ratnasekera P et al. | — | 2022 | → |
| Interspecific Gene Flow and Selective Sweeps in <i>Picea wilsonii</i>, <i>P. neoveitchii</i> and <i>P. likiangensis</i>. | Liu Y et al. | — | 2022 | → |
| Inverse Association of APOE ε4 and Glaucoma Modified by Systemic Hypertension: The Canadian Longitudinal Study on Aging. | Freeman EE et al. | — | 2022 | → |
| <i>SMOC2</i> gene interacts with <i>APOL1</i> in the development of end-stage kidney disease: A genome-wide association study. | Chaudhary NS et al. | — | 2022 | → |
| k mdiff, large-scale and user-friendly differential k-mer analyses. | Lemane T et al. | — | 2022 | → |
| Markhor-derived Introgression of a Genomic Region Encompassing PAPSS2 Confers High-altitude Adaptability in Tibetan Goats. | Li C et al. | — | 2022 | → |
| Meta-analysis of epigenome-wide association studies of major depressive disorder. | Li QS et al. | — | 2022 | → |
| Multiple migrations from East Asia led to linguistic transformation in NorthEast India and mainland Southeast Asia. | Tagore D et al. | — | 2022 | → |
| Neolithic genomic data from southern France showcase intensified interactions with hunter-gatherer communities. | Arzelier A et al. | — | 2022 | → |
| New insights into the novel sequences of the chicken pan-genome by liquid chip. | Wang F et al. | — | 2022 | → |
| Population dynamics of Baltic herring since the Viking Age revealed by ancient DNA and genomics. | Atmore LM et al. | — | 2022 | → |
| Population genomics of an icefish reveals mechanisms of glacier-driven adaptive radiation in Antarctic notothenioids. | Lu Y et al. | — | 2022 | → |
| Quality Control Procedures for Genome-Wide Association Studies. | Truong VQ et al. | — | 2022 | → |
| Somatic mutations during rapid clonal domestication of <i>Populus alba</i> var. <i>pyramidalis</i>. | Zheng Z et al. | — | 2022 | → |
| The genetic legacy of the Hunyadi descendants. | Neparáczki E et al. | — | 2022 | → |
| The influence of genetic structure on phenotypic diversity in the Australian mango (Mangifera indica) gene pool. | Wilkinson MJ et al. | — | 2022 | → |
| The role of genomic signatures of directional selection and demographic history in the population structure of a marine teleost with high gene flow. | Weist P et al. | — | 2022 | → |
| Two decades of association mapping: Insights on disease resistance in major crops. | Gangurde SS et al. | — | 2022 | → |
| Whole-blood methylation signatures are associated with and accurately classify multiple sclerosis disease severity. | Campagna MP et al. | — | 2022 | → |
| Whole-genome resequencing reveals genetic diversity, differentiation, and selection signatures of yak breeds/populations in Qinghai, China. | Li G et al. | — | 2022 | → |
| Whole-genome sequencing analysis of wild house mice (Mus musculus) captured in Madagascar. | Fujiwara K et al. | — | 2022 | → |