Genomewide suggestive linkage of opioid dependence to chromosome 14q.
- Authors
- Lachman, Herbert M; Fann, Cathy S J; Bartzis, Michael; Evgrafov, Oleg V; Rosenthal, Richard N; Nunes, Edward V; Miner, Christian; Santana, Maria; Gaffney, Jebediah; Riddick, Amy; Hsu, Chia-Lin; Knowles, James A
- Year
- 2007
- Journal
- Human molecular genetics
- PMID
- 17409192
- DOI
- 10.1093/hmg/ddm081
The genetic predisposition to addiction to opioids and other substances is transmitted as a complex genetic trait, which investigators are attempting to characterize using genetic linkage and association. We now report a high-density genome-wide linkage study of opioid dependence. We ascertained 305 DSM-IV opioid dependent affected sibling pairs from an ethnically mixed population of methadone maintained subjects and genotyped their DNA using Affymetrix 10K v2 arrays. Analysis with MERLIN identified a region on chromosome 14q with a non-parametric lod (NPL) of 3.30. Secondary analyses indicated that this locus was relatively specific to the self-identified Puerto Rican subset, as the NPL increased from 3.30 to 5.00 (NPL(Caucasian) = 0.05 and NPL(African Amer.) = 0.15). The 14q peak encompasses the NRXN3 gene (neurexin 3), which was previously identified as a potential candidate gene for addiction. Secondary analyses also identified several regions with gender-specific NPL scores greater than 2.00. The most significant was a peak on (10q) that increased from 0.90 to 3.22 when only males were considered (NPL(female) = 0.05). Our linkage data suggest specific chromosomal loci for future fine-mapping genetic analysis and support the hypothesis that ethnic and gender specific genes underlie addiction susceptibility.
No figures extracted from this document.
No chunks β full text not yet ingested.
No entities extracted from this document yet.
No uploaded files.
No citations found.
In this knowledge base
External
| Title | Authors | Journal | Year | Link |
|---|---|---|---|---|
| Genetic landscape of morphine response in BXD recombinant inbred mice. | Yin Q et al. | β | 2026 | β |
| Genomic Insights into Opioid Addiction: Identification of genomic variants from Gene Expression data | Ajmeriya S et al. | β | 2025 | β |
| Identification of variants from gene expression data of opioid-addicted patients. | Ajmeriya S et al. | β | 2025 | β |
| Orbitofrontal intronic circular RNA from Nrxn3 mediates reward learning and motivation for reward. | Dabrowski KR et al. | β | 2024 | β |
| Invited Expert Opinion- Bioinformatic and Limitation Directives to Help Adopt Genetic Addiction Risk Screening and Identify Preaddictive Reward Dysregulation: Required Analytic Evidence to Induce Dopamine Homeostatsis. | Blum K et al. | β | 2023 | β |
| Structure, function, and pathology of Neurexin-3. | Zhang R et al. | β | 2023 | β |
| Common genetic substrates of alcohol and substance use disorder severity revealed by pleiotropy detection against GWAS catalog in two populations. | Peng Q et al. | β | 2021 | β |
| Genomic and Personalized Medicine Approaches for Substance Use Disorders (SUDs) Looking at Genome-Wide Association Studies. | Cozzoli D et al. | β | 2021 | β |
| Neurexin-3 defines synapse- and sex-dependent diversity of GABAergic inhibition in ventral subiculum. | Boxer EE et al. | β | 2021 | β |
| Opioid Addiction and Opioid Receptor Dimerization: Structural Modeling of the OPRD1 and OPRM1 Heterodimer and Its Signaling Pathways. | Wu B et al. | β | 2021 | β |
| Genetic Basis of Aerobically Supported Voluntary Exercise: Results from a Selection Experiment with House Mice. | Hillis DA et al. | β | 2020 | β |
| Genome-Wide Association Study of Opioid Cessation. | Cox JW et al. | β | 2020 | β |
| Neuropharmacological and Neurogenetic Correlates of Opioid Use Disorder (OUD) As a Function of Ethnicity: Relevance to Precision Addiction Medicine. | Abijo T et al. | β | 2020 | β |
| Pharmacokinetic and pharmacodynamic considerations in developing a response to the opioid epidemic. | Balyan R et al. | β | 2020 | β |
| Prospects for finding the mechanisms of sex differences in addiction with human and model organism genetic analysis. | Datta U et al. | β | 2020 | β |
| Proteomic analysis reveals a biosignature of decreased synaptic protein in cerebrospinal fluid of major depressive disorder. | Al Shweiki MR et al. | β | 2020 | β |
| Neurexin 3 transmembrane and soluble isoform expression and splicing haplotype are associated with neuron inflammasome and Alzheimer's disease. | Hishimoto A et al. | β | 2019 | β |
| Opioid Addiction, Genetic Susceptibility, and Medical Treatments: A Review. | Wang SC et al. | β | 2019 | β |
| Low expression of aging-related NRXN3 is associated with Alzheimer disease: A systematic review and meta-analysis. | Zheng JJ et al. | β | 2018 | β |
| The Role of Cell Adhesion Molecule Genes Regulating Neuroplasticity in Addiction. | Muskiewicz DE et al. | β | 2018 | β |
| Sex-specific linkage scans in opioid dependence. | Yang BZ et al. | β | 2017 | β |
| [Genomwide association studies on obesity: what can we learn from these studies]. | Kronenberg F et al. | β | 2016 | β |
| Role of Epigenetics in Biology and Human Diseases. | Moosavi A et al. | β | 2016 | β |
| Transsynaptic Modulation of Kainate Receptor Functions by C1q-like Proteins. | Matsuda K et al. | β | 2016 | β |
| Distinct circuit-dependent functions of presynaptic neurexin-3 at GABAergic and glutamatergic synapses. | Aoto J et al. | β | 2015 | β |
| Genetics of Opioid Dependence: A Review of the Genetic Contribution to Opioid Dependence. | Mistry CJ et al. | β | 2014 | β |
| Genome-wide analysis of single nucleotide polymorphisms and copy number variants in fibromyalgia suggest a role for the central nervous system. | Docampo E et al. | β | 2014 | β |
| Introduction to deep sequencing and its application to drug addiction research with a focus on rare variants. | Wang S et al. | β | 2014 | β |
| Association study of NRXN3 polymorphisms with schizophrenia and risperidone-induced bodyweight gain in Chinese Han population. | Hu X et al. | β | 2013 | β |
| DNA pooling base genome-wide association study identifies variants at NRXN3 associated with delayed encephalopathy after acute carbon monoxide poisoning. | Li W et al. | β | 2013 | β |
| Examining the association of NRXN3 SNPs with borderline personality disorder phenotypes in heroin dependent cases and socio-economically disadvantaged controls. | Panagopoulos VN et al. | β | 2013 | β |
| Gene Γ smoking interactions on human brain gene expression: finding common mechanisms in adolescents and adults. | Wolock SL et al. | β | 2013 | β |
| Presynaptic neurexin-3 alternative splicing trans-synaptically controls postsynaptic AMPA receptor trafficking. | Aoto J et al. | β | 2013 | β |
| Association of neurexin 3 polymorphisms with smoking behavior. | Docampo E et al. | β | 2012 | β |
| Common and specific liability to addiction: approaches to association studies of opioid addiction. | Nielsen DA et al. | β | 2012 | β |
| Genome-wide association analysis of age-at-onset in Alzheimer's disease. | Kamboh MI et al. | β | 2012 | β |
| The genetics of substance dependence. | Wang JC et al. | β | 2012 | β |
| A genome-wide association study on obesity and obesity-related traits. | Wang K et al. | β | 2011 | β |
| Associations among types of impulsivity, substance use problems and neurexin-3 polymorphisms. | Stoltenberg SF et al. | β | 2011 | β |
| Development of patient-specific neurons in schizophrenia using induced pluripotent stem cells. | Pedrosa E et al. | β | 2011 | β |
| Modulation of cell adhesion systems by prenatal nicotine exposure in limbic brain regions of adolescent female rats. | Cao J et al. | β | 2011 | β |
| Profile of adipose tissue gene expression in premenopausal and postmenopausal women: site-specific differences. | Gomez-Santos C et al. | β | 2011 | β |
| RNA-Seq of human neurons derived from iPS cells reveals candidate long non-coding RNAs involved in neurogenesis and neuropsychiatric disorders. | Lin M et al. | β | 2011 | β |
| A genomewide association study of citalopram response in major depressive disorder. | Garriock HA et al. | β | 2010 | β |
| A genomewide association study of nicotine and alcohol dependence in Australian and Dutch populations. | Lind PA et al. | β | 2010 | β |
| Alcoholism and alternative splicing of candidate genes. | Sasabe T et al. | β | 2010 | β |
| EEG alpha phenotypes: linkage analyses and relation to alcohol dependence in an American Indian community study. | Ehlers CL et al. | β | 2010 | β |
| Genetics of drug dependence. | Gelernter J et al. | β | 2010 | β |
| Genome wide association for addiction: replicated results and comparisons of two analytic approaches. | Drgon T et al. | β | 2010 | β |
| Genome-wide association study identifies genes that may contribute to risk for developing heroin addiction. | Nielsen DA et al. | β | 2010 | β |
| Neurexins physically and functionally interact with GABA(A) receptors. | Zhang C et al. | β | 2010 | β |
| Parental consanguinity and susceptibility to drug abuse among offspring, a case-control study. | Saadat M et al. | β | 2010 | β |
| Rare NRXN1 promoter variants in patients with schizophrenia. | Shah AK et al. | β | 2010 | β |
| Search for genetic markers and functional variants involved in the development of opiate and cocaine addiction and treatment. | Yuferov V et al. | β | 2010 | β |
| New insights into the genetics of addiction. | Li MD et al. | β | 2009 | β |
| NRXN3 is a novel locus for waist circumference: a genome-wide association study from the CHARGE Consortium. | Heard-Costa NL et al. | β | 2009 | β |
| Thalamic transcriptome screening in three psychiatric states. | Chu TT et al. | β | 2009 | β |
| Addiction Reviews. Preface. | Uhl GR | β | 2008 | β |
| Copy variations in schizophrenia and bipolar disorder. | Lachman HM | β | 2008 | β |
| Genome-wide linkage analysis of heroin dependence in Han Chinese: results from Wave Two of a multi-stage study. | Glatt SJ et al. | β | 2008 | β |
| Genotype patterns that contribute to increased risk for or protection from developing heroin addiction. | Nielsen DA et al. | β | 2008 | β |
| Molecular genetics of addiction and related heritable phenotypes: genome-wide association approaches identify "connectivity constellation" and drug target genes with pleiotropic effects. | Uhl GR et al. | β | 2008 | β |
| Molecular genetics of successful smoking cessation: convergent genome-wide association study results. | Uhl GR et al. | β | 2008 | β |
| Neuroligins and neurexins link synaptic function to cognitive disease. | SΓΌdhof TC | β | 2008 | β |
| Nrxn3 upregulation in the globus pallidus of mice developing cocaine addiction. | Kelai S et al. | β | 2008 | β |
| Substance dependence low-density whole genome association study in two distinct American populations. | Yu Y et al. | β | 2008 | β |
| Neurexin 3 polymorphisms are associated with alcohol dependence and altered expression of specific isoforms. | Hishimoto A et al. | β | 2007 | β |