brain anatomy
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Related entities (43)
Mentioned in (185)
Papers in which this entity is mentioned.
- Investigation of a global mouse methylome atlas reveals subtype-specific copy number alterations in pediatric cancer models. (2026)
- Mapping the genetic landscape across 14 psychiatric disorders. (2026)
- Alcohol use disorder is associated with altered frontomedial phase-amplitude coupling strength during resting state. (2026)
- LINE-1 retrotransposons mediate cis-acting transcriptional control in human pluripotent stem cells and regulate early brain development. (2025)
- Nanopore-based cell-free DNA fragmentation and methylation profiles from the cerebral spinal fluid of patients with lung cancer brain metastases. (2025)
- Maternal and child immune profiles are associated with neurometabolite measures of early-life neuroinflammation in children who are HIV-exposed and uninfected: a South African birth cohort. (2025)
- Extrachromosomal DNA-Driven Oncogene Spatial Heterogeneity and Evolution in Glioblastoma. (2025)
- Connectome-seq: High-throughput Mapping of Neuronal Connectivity at Single-Synapse Resolution via Barcode Sequencing. (2025)
- Intranasal Administration of KCNN2 Blocking Peptide Improves Deficits in Cognitive Flexibility in Mouse Model of Fetal Alcohol Spectrum Disorders. (2025)
- Multi-omic quantitative trait loci link tandem repeat size variation to gene regulation in human brain. (2025)
- Rapid brain tumor classification from sparse epigenomic data. (2025)
- Efficient and accurate search in petabase-scale sequence repositories. (2025)
- Massively parallel reporter assay investigates shared genetic variants of eight psychiatric disorders. (2025)
- Maternal and child immune profiles are associated with neurometabolite measures of early-life neuroinflammation in children who are HIV-exposed and uninfected: a South African birth cohort. (2025)
- Genome-wide analyses identify 30 loci associated with obsessive-compulsive disorder. (2025)
- Synchronized long-read genome, methylome, epigenome and transcriptome profiling resolve a Mendelian condition. (2025)
- High-Parameter Spatial Multi-Omics through Histology-Anchored Integration (2025)
- Transcription start sites experience a high influx of heritable variants fueled by early development. (2025)
- Gastrulation-stage alcohol exposure induces similar rates of craniofacial malformations in male and female C57BL/6J mice. (2024)
- Splicing neoantigen discovery with SNAF reveals shared targets for cancer immunotherapy. (2024)
- Teachers' needs for an FASD-informed resource: a qualitative interview needs assessment based on the ADAPT-ITT framework. (2024)
- Subcortical volume in middle-aged adults with fetal alcohol spectrum disorders. (2024)
- Reduction of APOE accounts for neurobehavioral deficits in fetal alcohol spectrum disorders. (2024)
- Machine-guided design of cell-type-targeting cis-regulatory elements. (2024)
- Clinical, genomic, and neurophysiological correlates of lifetime suicide attempts among individuals with alcohol dependence. (2024)
- Detection and analysis of complex structural variation in human genomes across populations and in brains of donors with psychiatric disorders. (2024)
- Consortium Profile: The Methylation, Imaging and NeuroDevelopment (MIND) Consortium. (2024)
- Genome-wide association analyses identify 95 risk loci and provide insights into the neurobiology of post-traumatic stress disorder. (2024)
- Insights for precision oncology from the integration of genomic and clinical data of 13,880 tumors from the 100,000 Genomes Cancer Programme. (2024)
- Embryonic ethanol exposure disrupts craniofacial neuromuscular integration in zebrafish larvae. (2023)
- ESPRESSO: Robust discovery and quantification of transcript isoforms from error-prone long-read RNA-seq data. (2023)
- A DNA methylation atlas of normal human cell types. (2023)
- Human 3D brain organoids: steering the demolecularization of brain and neurological diseases. (2023)
- Gene-alcohol interactions in birth defects. (2023)
- A guide to the BRAIN Initiative Cell Census Network data ecosystem. (2023)
- Alcohol and Immunology: Mechanisms of multi-organ damage. Summary of the 2022 alcohol and Immunology research interest group (AIRIG) meeting. (2023)
- High-throughput detection of craniofacial defects in fluorescent zebrafish. (2023)
- Current considerations for fetal alcohol spectrum disorders: identification to intervention. (2023)
- Towards understandings of serine/arginine-rich splicing factors. (2023)
- RNA splicing dysregulation and the hallmarks of cancer. (2023)
- Multi-trait genome-wide association study of opioid addiction: OPRM1 and beyond. (2022)
- Prenatal alcohol exposure contributes to negative pregnancy outcomes by altering fetal vascular dynamics and the placental transcriptome. (2022)
- mutations, genetic mosaicism and human disease. (2022)
- Item-Level Genome-Wide Association Study of the Alcohol Use Disorders Identification Test in Three Population-Based Cohorts. (2022)
- Prenatal alcohol exposure can be determined from baby teeth: Proof of concept. (2022)
- Lack of Evidence for a Relationship Between Salivary CRP and Women's Sexual Desire: An Investigation Across Clinical and Healthy Samples. (2022)
- Cell-free DNA technologies for the analysis of brain cancer. (2022)
- The impact of prenatal alcohol exposure on gray matter volume and cortical surface area of 2 to 3-year-old children in a South African birth cohort. (2022)
- Inferring gene expression from cell-free DNA fragmentation profiles. (2022)
- Gene-based polygenic risk scores analysis of alcohol use disorder in African Americans. (2022)
- Large-scale collaboration in ENIGMA-EEG: A perspective on the meta-analytic approach to link neurological and psychiatric liability genes to electrophysiological brain activity. (2021)
- Genome-wide admixture mapping of DSM-IV alcohol dependence, criterion count, and the self-rating of the effects of ethanol in African American populations. (2021)
- Prenatal Adversity Alters the Epigenetic Profile of the Prefrontal Cortex: Sexually Dimorphic Effects of Prenatal Alcohol Exposure and Food-Related Stress. (2021)
- Alternative splicing: Human disease and quantitative analysis from high-throughput sequencing. (2021)
- Transcriptomic analyses of gastrulation-stage mouse embryos with differential susceptibility to alcohol. (2021)
- Programmed suppression of oxidative phosphorylation and mitochondrial function by gestational alcohol exposure correlate with widespread increases in H3K9me2 that do not suppress transcription. (2021)
- Multivariate analysis of 1.5 million people identifies genetic associations with traits related to self-regulation and addiction. (2021)
- Data structures based on -mers for querying large collections of sequencing data sets. (2021)
- Initial Feasibility of the "Families Moving Forward Connect" Mobile Health Intervention for Caregivers of Children With Fetal Alcohol Spectrum Disorders: Mixed Method Evaluation Within a Systematic User-Centered Design Approach. (2021)
- Prenatal alcohol exposure disrupts Sonic hedgehog pathway and primary cilia genes in the mouse neural tube. (2021)
- Simultaneous single cell measurements of intranuclear proteins and gene expression (2021)
- Cross-Sectional Analysis of Spatial Working Memory Development in Children with Histories of Heavy Prenatal Alcohol Exposure. (2021)
- Structural and functional brain network alterations in prenatal alcohol exposed neonates. (2021)
- The Allen Mouse Brain Common Coordinate Framework: A 3D Reference Atlas. (2020)
- Validity of automated FreeSurfer segmentation compared to manual tracing in detecting prenatal alcohol exposure-related subcortical and corpus callosal alterations in 9- to 11-year-old children. (2020)
- Alterations in the whole brain network organization after prenatal ethanol exposure. (2020)
- Multi-cancer analysis of clonality and the timing of systemic spread in paired primary tumors and metastases. (2020)
- Kcnn2 blockade reverses learning deficits in a mouse model of fetal alcohol spectrum disorders. (2020)
- Neurodevelopment in adolescents and adults with fetal alcohol spectrum disorders (FASD): A magnetic resonance region of interest analysis. (2020)
- HSP70 and HSP90 in neurodegenerative diseases. (2020)
- Transcriptome-Wide Regulation of Key Developmental Pathways in the Mouse Neural Tube by Prenatal Alcohol Exposure. (2020)
- Effects of chronic intermittent ethanol exposure and withdrawal on neuroblastoma cell transcriptome. (2020)
- Long-term spatial tracking of cells affected by environmental insults. (2020)
- Genome-wide meta-analysis of problematic alcohol use in 435,563 individuals yields insights into biology and relationships with other traits. (2020)
- Data structures based on <i>k</i> -mers for querying large collections of sequencing datasets (2019)
- Hypermethylation of Proopiomelanocortin and Period 2 Genes in Blood Are Associated with Greater Subjective and Behavioral Motivation for Alcohol in Humans. (2019)
- Linking genes, circuits, and behavior: network connectivity as a novel endophenotype of externalizing. (2019)
- Differentially sensitive neuronal subpopulations in the central nervous system and the formation of hindbrain heterotopias in ethanol-exposed zebrafish. (2019)
- The mutational constraint spectrum quantified from variation in 141,456 humans (2019)
- Maternal choline supplementation mitigates alcohol-induced fetal cranio-facial abnormalities detected using an ultrasonographic examination in a sheep model. (2019)
- Ethanol activates immune response in lymphoblastoid cells. (2019)
- Association Between Age and Familial Risk for Alcoholism on Functional Connectivity in Adolescence. (2019)
- Serial liquid biopsies for detection of treatment failure and profiling of resistance mechanisms in -rearranged lung cancer. (2019)
- Attention and corpus callosum volumes in individuals with mucopolysaccharidosis type I. (2019)
- Genome-wide association studies of alcohol dependence, DSM-IV criterion count and individual criteria. (2019)
- RNA sequence analysis reveals macroscopic somatic clonal expansion across normal tissues. (2019)
- Recurrent noncoding U1 snRNA mutations drive cryptic splicing in SHH medulloblastoma. (2019)
- Genome-wide association analysis links multiple psychiatric liability genes to oscillatory brain activity. (2018)
- Enter the Matrix: Factorization Uncovers Knowledge from Omics. (2018)
- Genome-wide association study identifies a novel locus for cannabis dependence. (2018)
- A compendium of conserved cleavage and polyadenylation events in mammalian genes. (2018)
- Meta-Analysis of Genetic Influences on Initial Alcohol Sensitivity. (2018)
- VP-Nets : Efficient automatic localization of key brain structures in 3D fetal neurosonography. (2018)
- RNentropy: an entropy-based tool for the detection of significant variation of gene expression across multiple RNA-Seq experiments. (2018)
- Diving into the world of alcohol teratogenesis: a review of zebrafish models of fetal alcohol spectrum disorder. (2018)
- Neural correlates of verbal memory in youth with heavy prenatal alcohol exposure. (2018)
- The enduring impact of neurulation stage alcohol exposure: A combined behavioral and structural neuroimaging study in adult male and female C57BL/6J mice. (2018)
- Annotation-free quantification of RNA splicing using LeafCutter. (2018)
- SCANPY: large-scale single-cell gene expression data analysis. (2018)
- Statistical algorithms improve accuracy of gene fusion detection. (2017)
- Facial Curvature Detects and Explicates Ethnic Differences in Effects of Prenatal Alcohol Exposure. (2017)
- Orthotopic patient-derived xenografts of paediatric solid tumours. (2017)
- Gene-environment interactions in development and disease. (2017)
- A practical guide to single-cell RNA-sequencing for biomedical research and clinical applications. (2017)
- Epigenetics studies of fetal alcohol spectrum disorder: where are we now? (2017)
- Reductions in Corpus Callosum Volume Partially Mediate Effects of Prenatal Alcohol Exposure on IQ. (2017)
- Longitudinal changes in pubertal maturation and white matter microstructure. (2017)
- Puberty and structural brain development in humans. (2017)
- PGBD5 promotes site-specific oncogenic mutations in human tumors. (2017)
- Dietary choline levels modify the effects of prenatal alcohol exposure in rats. (2017)
- 2D Representation of Transcriptomes by t-SNE Exposes Relatedness between Human Tissues. (2016)
- Fragment Length of Circulating Tumor DNA. (2016)
- Roar: detecting alternative polyadenylation with standard mRNA sequencing libraries. (2016)
- Acute alcohol exposure during neurulation: Behavioral and brain structural consequences in adolescent C57BL/6J mice. (2016)
- Drinking During Pregnancy and the Developing Brain: Is Any Amount Safe? (2016)
- Estimating the population abundance of tissue-infiltrating immune and stromal cell populations using gene expression. (2016)
- The PsychENCODE project. (2015)
- Executive function and cortical thickness in youths prenatally exposed to cocaine, alcohol and tobacco. (2015)
- A gene-based association method for mapping traits using reference transcriptome data. (2015)
- Handling changes in MRI acquisition parameters in modeling whole brain lesion volume and atrophy data in multiple sclerosis subjects: Comparison of linear mixed-effect models. (2015)
- Atypical cortical gyrification in adolescents with histories of heavy prenatal alcohol exposure. (2015)
- What Happens When Children with Fetal Alcohol Spectrum Disorders Become Adults? (2015)
- Peroxisome proliferator-activated receptors α and γ are linked with alcohol consumption in mice and withdrawal and dependence in humans. (2015)
- The impact of micronutrient supplementation in alcohol-exposed pregnancies on information processing skills in Ukrainian infants. (2015)
- Splicing Express: a software suite for alternative splicing analysis using next-generation sequencing data. (2015)
- The landscape of long noncoding RNAs in the human transcriptome. (2015)
- Dissecting FASD through the global transcriptome. (2015)
- An in vivo 1H magnetic resonance spectroscopy study of the deep cerebellar nuclei in children with fetal alcohol spectrum disorders. (2014)
- A comparison of spectral quality in magnetic resonance spectroscopy data acquired with and without a novel EPI-navigated PRESS sequence in school-aged children with fetal alcohol spectrum disorders. (2014)
- RNA-binding protein RBM20 represses splicing to orchestrate cardiac pre-mRNA processing. (2014)
- A screen of zebrafish mutants identifies ethanol-sensitive genetic loci. (2014)
- A tensor-based morphometry analysis of regional differences in brain volume in relation to prenatal alcohol exposure. (2014)
- Characterization of subtle brain abnormalities in a mouse model of Hedgehog pathway antagonist-induced cleft lip and palate. (2014)
- Fetal Alcohol Spectrum Disorders: Recent Neuroimaging Findings. (2014)
- Dynamic analyses of alternative polyadenylation from RNA-seq reveal a 3'-UTR landscape across seven tumour types. (2014)
- Automated cerebellar segmentation: Validation and application to detect smaller volumes in children prenatally exposed to alcohol. (2014)
- Dysmorphogenic effects of first trimester-equivalent ethanol exposure in mice: a magnetic resonance microscopy-based study. (2014)
- Mitogen-activated protein kinase modulates ethanol inhibition of cell adhesion mediated by the L1 neural cell adhesion molecule. (2013)
- Rbfox proteins regulate alternative mRNA splicing through evolutionarily conserved RNA bridges. (2013)
- A genome-wide association study of alcohol-dependence symptom counts in extended pedigrees identifies C15orf53. (2013)
- A meta-analysis of two genome-wide association studies to identify novel loci for maximum number of alcoholic drinks. (2013)
- Pdgfra protects against ethanol-induced craniofacial defects in a zebrafish model of FASD. (2013)
- Whole-genome sequencing identifies genetic alterations in pediatric low-grade gliomas. (2013)
- The Genotype-Tissue Expression (GTEx) project. (2013)
- Magnetic resonance microscopy-based analyses of the neuroanatomical effects of gestational day 9 ethanol exposure in mice. (2013)
- Relation over time between facial measurements and cognitive outcomes in fetal alcohol-exposed children. (2012)
- Common inversion polymorphism at 17q21.31 affects expression of multiple genes in tissue-specific manner. (2012)
- Along-tract statistics allow for enhanced tractography analysis. (2012)
- Amyloid pathway-based candidate gene analysis of [(11)C]PiB-PET in the Alzheimer's Disease Neuroimaging Initiative (ADNI) cohort. (2012)
- Large-scale objective phenotyping of 3D facial morphology. (2012)
- Alcohol delays the emergence of the fetal elicited startle response, but only transiently. (2012)
- Executive function predicts adaptive behavior in children with histories of heavy prenatal alcohol exposure and attention-deficit/hyperactivity disorder. (2012)
- Uberon, an integrative multi-species anatomy ontology. (2012)
- Alt Event Finder: a tool for extracting alternative splicing events from RNA-seq data. (2012)
- Divergent roles of ALS-linked proteins FUS/TLS and TDP-43 intersect in processing long pre-mRNAs. (2012)
- Ethanol-induced face-brain dysmorphology patterns are correlative and exposure-stage dependent. (2012)
- A longitudinal study of the long-term consequences of drinking during pregnancy: heavy in utero alcohol exposure disrupts the normal processes of brain development. (2012)
- Patient-derived tumour xenografts as models for oncology drug development. (2012)
- Fetal brain function in response to maternal alcohol consumption: early evidence of damage. (2012)
- HLA typing from RNA-Seq sequence reads. (2012)
- Fetal alcohol spectrum disorders: an overview. (2011)
- Differential expression in RNA-seq: a matter of depth. (2011)
- Long pre-mRNA depletion and RNA missplicing contribute to neuronal vulnerability from loss of TDP-43. (2011)
- Fetal alcohol spectrum disorders: research challenges and opportunities. (2011)
- Magnetic resonance-based imaging in animal models of fetal alcohol spectrum disorder. (2011)
- Functional consequences of developmentally regulated alternative splicing. (2011)
- Gene-environment interaction in psychological traits and disorders. (2011)
- Focus on: magnetic resonance-based studies of fetal alcohol spectrum disorders in animal models. (2011)
- Mechanisms and consequences of alternative polyadenylation. (2011)
- Agrin function associated with ocular development is a target of ethanol exposure in embryonic zebrafish. (2011)
- Imaging the impact of prenatal alcohol exposure on the structure of the developing human brain. (2011)
- Genome-wide association study of theta band event-related oscillations identifies serotonin receptor gene HTR7 influencing risk of alcohol dependence. (2011)
- Transcriptional and epigenetic mechanisms of addiction. (2011)
- Dysfunctional reward processing in male alcoholics: an ERP study during a gambling task. (2010)
- Magnetic resonance microscopy defines ethanol-induced brain abnormalities in prenatal mice: effects of acute insult on gestational day 7. (2010)
- Structural, metabolic, and functional brain abnormalities as a result of prenatal exposure to drugs of abuse: evidence from neuroimaging. (2010)
- Magnetic resonance microscopy-based analyses of the brains of normal and ethanol-exposed fetal mice. (2010)
- The plausibility of maternal nutritional status being a contributing factor to the risk for fetal alcohol spectrum disorders: the potential influence of zinc status as an example. (2010)
- Differentiating prenatal exposure to methamphetamine and alcohol versus alcohol and not methamphetamine using tensor-based brain morphometry and discriminant analysis. (2010)
- Splicing factor SFRS1 recognizes a functionally diverse landscape of RNA transcripts. (2009)
- Insulin-like growth factor-I mitigates motor coordination deficits associated with neonatal alcohol exposure in rats. (2009)
- 3' end mRNA processing: molecular mechanisms and implications for health and disease. (2008)
- Mapping white matter integrity and neurobehavioral correlates in children with fetal alcohol spectrum disorders. (2008)
- HITS-CLIP yields genome-wide insights into brain alternative RNA processing. (2008)
- Alcoholism and human electrophysiology. (2003)
Merged raw entities (29)
All extracted name/type variants the normalize job merged into this entity. Use this to spot wrong merges, or aliases that should be split off.
| Raw name | Type | Papers | Mentions |
|---|---|---|---|
| brain | anatomy | 827 | 1688 |
| brain region | anatomy | 123 | 168 |
| adult brain | anatomy | 98 | 171 |
| brain regions | anatomy | 79 | 94 |
| brain areas | anatomy | 19 | 25 |
| adult brain | cohort | 14 | 14 |
| adult human brain | anatomy | 10 | 13 |
| normal brain | anatomy | 7 | 10 |
| brains | anatomy | 3 | 3 |
| adult brain tissue | anatomy | 2 | 2 |
| cns region | anatomy | 2 | 2 |
| different brain regions | anatomy | 2 | 2 |
| some brain regions | anatomy | 2 | 2 |
| 90 brain regions | anatomy | 1 | 1 |
| regions | anatomy | 1 | 1 |
| 13 brain regions | anatomy | — | — |
| 20 to 60 years of age and older | anatomy | — | — |
| ad patients' brain | anatomy | — | — |
| adulthood | anatomy | — | — |
| brain samples | anatomy | — | — |
| central nervous system region | anatomy | — | — |
| cranio | anatomy | — | — |
| different areas of the brain | anatomy | — | — |
| multiple regions | anatomy | — | — |
| postmortem brains | anatomy | — | — |
| spatially-distinct brain regions | anatomy | — | — |
| specific cns regions | anatomy | — | — |
| unsampled regions | anatomy | — | — |
| various regions of the brain | anatomy | — | — |