RNA drug

Aliases

Total RNA, ribonucleic acid, total RNA

External links

DrugBank · PubChem

No related entities found.

Mentioned in (133)

Papers in which this entity is mentioned.

• Genome modelling and design across all domains of life with Evo 2. (2026)
• A guide to transcriptomic deconvolution in cancer. (2026)
• Artificial Intelligence agents for biological research: a survey. (2026)
• Integrated in vivo combinatorial functional genomics and spatial transcriptomics of tumours to decode genotype-to-phenotype relationships. (2026)
• Single-cell exon deletion profiling reveals splicing events that shape gene expression and cell state dynamics. (2026)
• Whole-genome landscapes of 1,364 breast cancers. (2026)
• LINE-1 retrotransposons mediate cis-acting transcriptional control in human pluripotent stem cells and regulate early brain development. (2025)
• Enhancer activation from transposable elements in extrachromosomal DNA. (2025)
• Stratified Medicine Pediatrics: Cell-Free DNA and Serial Tumor Sequencing Identifies Subtype-Specific Cancer Evolution and Epigenetic States. (2025)
• Connectome-seq: High-throughput Mapping of Neuronal Connectivity at Single-Synapse Resolution via Barcode Sequencing. (2025)
• Tumour-wide RNA splicing aberrations generate actionable public neoantigens. (2025)
• Multi-omic quantitative trait loci link tandem repeat size variation to gene regulation in human brain. (2025)
• Rapid brain tumor classification from sparse epigenomic data. (2025)
• Efficient and accurate search in petabase-scale sequence repositories. (2025)
• Massively parallel reporter assay investigates shared genetic variants of eight psychiatric disorders. (2025)
• Functional analysis of cancer-associated germline risk variants. (2025)
• Flexynesis: A deep learning toolkit for bulk multi-omics data integration for precision oncology and beyond. (2025)
• Integrated single-cell multiomic profiling of caudate nucleus suggests key mechanisms in alcohol use disorder. (2025)
• Single cell and spatial alternative splicing analysis with Nanopore long read sequencing. (2025)
• Alcohol Exposure May Increase Prenatal Choline Needs Through Redirection of Choline into Lipid Synthesis Rather than Methyl Donation. (2025)
• MYC ecDNA promotes intratumour heterogeneity and plasticity in PDAC. (2025)
• Foundation models in bioinformatics. (2025)
• Transcription start sites experience a high influx of heritable variants fueled by early development. (2025)
• Global impact of unproductive splicing on human gene expression. (2024)
• Sequence modeling and design from molecular to genome scale with Evo. (2024)
• Integrated Single-Cell Multiomic Profiling of Caudate Nucleus Suggests Key Mechanisms in Alcohol Use Disorder. (2024)
• Alternative splicing of transcript mediates the response of circadian clocks to temperature changes. (2024)
• Insights for precision oncology from the integration of genomic and clinical data of 13,880 tumors from the 100,000 Genomes Cancer Programme. (2024)
• The Application of Long-Read Sequencing to Cancer. (2024)
• A survey of mapping algorithms in the long-reads era. (2023)
• Towards understandings of serine/arginine-rich splicing factors. (2023)
• GenSLMs: Genome-scale language models reveal SARS-CoV-2 evolutionary dynamics. (2022)
• Nanopore sequencing of RNA and cDNA molecules in . (2022)
• Human Retrotransposons and Effective Computational Detection Methods for Next-Generation Sequencing Data. (2022)
• Massively parallel reporter perturbation assays uncover temporal regulatory architecture during neural differentiation. (2022)
• Estimation of tumor cell total mRNA expression in 15 cancer types predicts disease progression. (2022)
• Inferring gene expression from cell-free DNA fragmentation profiles. (2022)
• Feasibility of whole genome and transcriptome profiling in pediatric and young adult cancers. (2022)
• Most non-canonical proteins uniquely populate the proteome or immunopeptidome. (2021)
• Nanopore sequencing technology, bioinformatics and applications. (2021)
• Integrated Genomic Analysis Identifies Driver Genes and Cisplatin-Resistant Progenitor Phenotype in Pediatric Liver Cancer. (2021)
• Application of third-generation sequencing in cancer research. (2021)
• Alternative splicing: Human disease and quantitative analysis from high-throughput sequencing. (2021)
• Joint single-cell measurements of nuclear proteins and RNA in vivo. (2021)
• Exposure to ethanol leads to midfacial hypoplasia in a zebrafish model of FASD via indirect interactions with the Shh pathway. (2021)
• Simultaneous single cell measurements of intranuclear proteins and gene expression (2021)
• NUP98-NSD1 Driven MDS/MPN in Childhood Masquerading as JMML. (2021)
• Discovery of regulatory noncoding variants in individual cancer genomes by using cis-X. (2020)
• B cells and tertiary lymphoid structures promote immunotherapy response. (2020)
• Emerging Roles of SRSF3 as a Therapeutic Target for Cancer. (2020)
• Effects of chronic intermittent ethanol exposure and withdrawal on neuroblastoma cell transcriptome. (2020)
• Comprehensive analysis of structural variants in breast cancer genomes using single-molecule sequencing. (2020)
• Hypermethylation of Proopiomelanocortin and Period 2 Genes in Blood Are Associated with Greater Subjective and Behavioral Motivation for Alcohol in Humans. (2019)
• Genetic compensation triggered by mutant mRNA degradation. (2019)
• Whole-genome sequencing of triple-negative breast cancers in a population-based clinical study. (2019)
• Fast and robust deconvolution of tumor infiltrating lymphocyte from expression profiles using least trimmed squares. (2019)
• RNA-Seq Signatures Normalized by mRNA Abundance Allow Absolute Deconvolution of Human Immune Cell Types. (2019)
• Genome-Informed Targeted Therapy for Osteosarcoma. (2019)
• The role and robustness of the Gini coefficient as an unbiased tool for the selection of Gini genes for normalising expression profiling data. (2019)
• RNA sequence analysis reveals macroscopic somatic clonal expansion across normal tissues. (2019)
• Persistent Changes in Stress-Regulatory Genes in Pregnant Women or Children Exposed Prenatally to Alcohol. (2019)
• Best practices for bioinformatic characterization of neoantigens for clinical utility. (2019)
• Circular DNA elements of chromosomal origin are common in healthy human somatic tissue. (2018)
• SSMART: sequence-structure motif identification for RNA-binding proteins. (2018)
• A SNP panel for identification of DNA and RNA specimens. (2018)
• The Cancer Spliceome: Reprograming of Alternative Splicing in Cancer. (2018)
• Sequence, Structure, and Context Preferences of Human RNA Binding Proteins. (2018)
• Pan-cancer genome and transcriptome analyses of 1,699 paediatric leukaemias and solid tumours. (2018)
• A compendium of conserved cleavage and polyadenylation events in mammalian genes. (2018)
• Positively selected enhancer elements endow osteosarcoma cells with metastatic competence. (2018)
• Clinical cancer genomic profiling by three-platform sequencing of whole genome, whole exome and transcriptome. (2018)
• Integrated Molecular Meta-Analysis of 1,000 Pediatric High-Grade and Diffuse Intrinsic Pontine Glioma. (2017)
• Statistical algorithms improve accuracy of gene fusion detection. (2017)
• ChimeRScope: a novel alignment-free algorithm for fusion transcript prediction using paired-end RNA-Seq data. (2017)
• Patient-derived xenografts undergo mouse-specific tumor evolution. (2017)
• Orthotopic patient-derived xenografts of paediatric solid tumours. (2017)
• Mutational landscape of metastatic cancer revealed from prospective clinical sequencing of 10,000 patients. (2017)
• Alternative Polyadenylation Directs Tissue-Specific miRNA Targeting in Somatic Tissues. (2017)
• Cancer-Specific Retargeting of BAF Complexes by a Prion-like Domain. (2017)
• A method to reduce ancestry related germline false positives in tumor only somatic variant calling. (2017)
• Interaction of glycosphingolipids GD3 and GD2 with growth factor receptors maintains breast cancer stem cell phenotype. (2017)
• PGBD5 promotes site-specific oncogenic mutations in human tumors. (2017)
• The Ontology for Biomedical Investigations. (2016)
• Somatic cancer variant curation and harmonization through consensus minimum variant level data. (2016)
• Medulloblastoma-associated DDX3 variant selectively alters the translational response to stress. (2016)
• Global analysis of somatic structural genomic alterations and their impact on gene expression in diverse human cancers. (2016)
• Landscape of somatic mutations in 560 breast cancer whole-genome sequences. (2016)
• Divergent clonal evolution of castration-resistant neuroendocrine prostate cancer. (2016)
• Roar: detecting alternative polyadenylation with standard mRNA sequencing libraries. (2016)
• Three decades of nanopore sequencing. (2016)
• Evolutionary Insights into RNA trans-Splicing in Vertebrates. (2016)
• Development and clinical application of an integrative genomic approach to personalized cancer therapy. (2016)
• Estimating the population abundance of tissue-infiltrating immune and stromal cell populations using gene expression. (2016)
• Tools and best practices for data processing in allelic expression analysis. (2015)
• EWS and FUS bind a subset of transcribed genes encoding proteins enriched in RNA regulatory functions. (2015)
• Design and bioinformatics analysis of genome-wide CLIP experiments. (2015)
• Position-specific binding of FUS to nascent RNA regulates mRNA length. (2015)
• Systematic pan-cancer analysis of tumour purity. (2015)
• Assessing Computational Steps for CLIP-Seq Data Analysis. (2015)
• The use of exome capture RNA-seq for highly degraded RNA with application to clinical cancer sequencing. (2015)
• Comprehensive genomic profiles of small cell lung cancer. (2015)
• Oncogenic fusion protein EWS-FLI1 is a network hub that regulates alternative splicing. (2015)
• MBASED: allele-specific expression detection in cancer tissues and cell lines. (2014)
• RADIA: RNA and DNA integrated analysis for somatic mutation detection. (2014)
• A comprehensive assessment of RNA-seq accuracy, reproducibility and information content by the Sequencing Quality Control Consortium. (2014)
• RNA-binding protein RBM20 represses splicing to orchestrate cardiac pre-mRNA processing. (2014)
• Maternal and neonatal plasma microRNA biomarkers for fetal alcohol exposure in an ovine model. (2014)
• Inference of high resolution HLA types using genome-wide RNA or DNA sequencing reads. (2014)
• Ewing sarcoma protein: a key player in human cancer. (2013)
• ACMG clinical laboratory standards for next-generation sequencing. (2013)
• Whole-genome sequencing identifies genetic alterations in pediatric low-grade gliomas. (2013)
• The Genotype-Tissue Expression (GTEx) project. (2013)
• LIN28B promotes growth and tumorigenesis of the intestinal epithelium via Let-7. (2013)
• An Inv(16)(p13.3q24.3)-encoded CBFA2T3-GLIS2 fusion protein defines an aggressive subtype of pediatric acute megakaryoblastic leukemia. (2012)
• The future of DNA sequence archiving. (2012)
• Circular RNAs are the predominant transcript isoform from hundreds of human genes in diverse cell types. (2012)
• An integrated encyclopedia of DNA elements in the human genome. (2012)
• Summarizing and correcting the GC content bias in high-throughput sequencing. (2012)
• HLA typing from RNA-Seq sequence reads. (2012)
• Differential expression in RNA-seq: a matter of depth. (2011)
• Long pre-mRNA depletion and RNA missplicing contribute to neuronal vulnerability from loss of TDP-43. (2011)
• Effects of ethanol and NAP on cerebellar expression of the neural cell adhesion molecule L1. (2011)
• ViennaRNA Package 2.0. (2011)
• Integrative analysis of the melanoma transcriptome. (2010)
• DNA copy number, including telomeres and mitochondria, assayed using next-generation sequencing. (2010)
• Rapid, low-input, low-bias construction of shotgun fragment libraries by high-density in vitro transposition. (2010)
• The Sanger FASTQ file format for sequences with quality scores, and the Solexa/Illumina FASTQ variants. (2010)
• Splicing factor SFRS1 recognizes a functionally diverse landscape of RNA transcripts. (2009)
• Computation for ChIP-seq and RNA-seq studies. (2009)
• 3' end mRNA processing: molecular mechanisms and implications for health and disease. (2008)
• RNA-seq: an assessment of technical reproducibility and comparison with gene expression arrays. (2008)
• HITS-CLIP yields genome-wide insights into brain alternative RNA processing. (2008)
• Taverna: a tool for building and running workflows of services. (2006)

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