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rs16969968 associated_with European ancestry

Subject
rs16969968
Relation
associated_with
Object
European ancestry
p-value
4.14e-07
Evidence from: primary | all sources

Evidence (7 sources)

Identification of CHRNA5 rare variants in African-American heavy smokers. (2014) PMID:24682045 cited
rs16969968:G>A has a low minor allele frequency (MAF) in populations other than those of European descent
confidence: 0.80
Multiple cholinergic nicotinic receptor genes affect nicotine dependence risk in African and European Americans. (2010) PMID:20584212 cited
variation explained by the chromosome 15q25 SNPs rs16969968 ... is 1.9% in both EAs and AAs.
confidence: 0.90
Multiple cholinergic nicotinic receptor genes affect nicotine dependence risk in African and European Americans. (2010) PMID:20584212 cited
In EAs, rs16969968 has the highest individual R2 of the SNPs considered (1.4%).
confidence: 0.95
The CHRNA5-CHRNA3-CHRNB4 nicotinic receptor subunit gene cluster affects risk for nicotine dependence in African-Americans and in European-Americans. (2009) PMID:19706762 cited
at rs16969968 the ... EA odds ratios are not significantly different (heterogeneity p = 0.24)
confidence: 0.90
The CHRNA5-CHRNA3-CHRNB4 nicotinic receptor subunit gene cluster affects risk for nicotine dependence in African-Americans and in European-Americans. (2009) PMID:19706762 cited
consistent direction of effect of the “A” risk allele in EAs
confidence: 0.92
The CHRNA5-CHRNA3-CHRNB4 nicotinic receptor subunit gene cluster affects risk for nicotine dependence in African-Americans and in European-Americans. (2009) PMID:19706762 cited
rs16969968 is the most significant of the 76 SNPs in the EAs alone (p = 4.14×10−7, OR = 1.40...).
confidence: 0.96
The CHRNA5-CHRNA3-CHRNB4 nicotinic receptor subunit gene cluster affects risk for nicotine dependence in African-Americans and in European-Americans. (2009) PMID:19706762 cited
among “CCs” at rs578776, rs16969968 has p = 0.0039, OR = 1.29 (1.09–1.54)
confidence: 0.95