SNP interacts_with gene
Evidence from:
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Evidence (5 sources)
Multivariate analysis of 1.5 million people identifies genetic associations with traits related to self-regulation and addiction.
(2021)
PMID:34446935
primary
assigns non-coding SNPs to cognate genes based on chromatin interactions in adult brain tissue
confidence: 0.85
Large-scale cis- and trans-eQTL analyses identify thousands of genetic loci and polygenic scores that regulate blood gene expression.
(2021)
PMID:34475573
cited
The associations between these SNP–gene combinations are calculated using Spearman correlation.
confidence: 0.95
Genetic variability in the regulation of gene expression in ten regions of the human brain.
(2014)
PMID:25174004
cited
the heterogeneity model ... plus a set of fixed-effect SNP dosage × exon ID interaction terms.
confidence: 0.88
i-GSEA4GWAS: a web server for identification of pathways/gene sets associated with traits by applying an improved gene set enrichment analysis to genome-wide association study.
(2010)
PMID:20435672
cited
combined SNP/gene effects representing interactions of multiple genetic factors of complex disease
confidence: 0.80
SNPinfo: integrating GWAS and candidate gene information into functional SNP selection for genetic association studies.
(2009)
PMID:19417063
cited
TagSNP ... produce high quality LD or genotype figures for individual genes or chromosome regions.
confidence: 0.94