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Chunk #15 — Results — Association and segregation of common variants with psychiatric illness and related quantitative traits

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708 Common and 2010 rare DISC1 locus variants identified in 1542 subjects: analysis for association with psychiatric disorder and cognitive traits.
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SNP rs16856199 is on the Affymetrix 6.0 array, but the best tagging SNP on the Illumina 660W-Quad, Human Hap, Human1M-Duo arrays is rs16856189. SNP rs16856189 has an r2 of 0.27 with rs16856199, which may explain in part why this association has not been reported previously in genome-wide association studies.22, 62, 63 SNP rs6678723, which lies 2.1 kb distal to this SNP within intron 11, showed the most significant association of DISC1 in the recent mega-analysis of depression (P=0.0092).20