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Chunk #5 — Methods — Samples

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Using polygenic scores for identifying individuals at increased risk of substance use disorders in clinical and population samples.
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The Collaborative Study on the Genetics of Alcoholism (COGA) is a sample of high-risk families ascertained through adult probands in treatment for AUD and a smaller set of comparison families from the same communities. In the first 10 years, probands along with all willing first-degree relatives were assessed; recruitment was extended to include additional relatives. Data collection included the SSAGA19, neurophysiological and neuropsychological protocols, and collection of blood for DNA. In 2004, COGA began a prospective study of adolescents and young adults, targeting assessment of youth aged 12–22 from COGA families where at least one parent had been interviewed. These young participants were re-assessed every two years. The sample is racially/ethnically diverse (60.6% non-Hispanic White, 24.9% Black, 11.1% Hispanic, and 3.4% other). Most (84%) have GWAS data. A full description of the COGA sample is available elsewhere21–23. For the present study, we only focused on COGA participants of empirically assigned (as verified from GWAS data) European ancestry (n = 7599) because each of the discovery GWAS samples were primarily of European ancestry. Ancestral mismatch between discovery and target samples can lead to bias in the performance of polygenic scores24.