Chunk #28 — DISCUSSION — Methods Summary — Lineage expression affects

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lincRNAs act in the circuitry controlling pluripotency and differentiation.

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yes

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Lineage expression programs were defined using published datasets (GSE12982, GSE11523, and GSE4082) and curated gene expression signatures32,33. Overlaps in gene expression affects were assessed using a modified GSEA34. Expression changes in lineage markers were determined using qPCR.