paperKB
coga / coga-kb
Help
Sign in

Chunk #12 — Background — Data generation

Source
Construction of the model for the Genetic Analysis Workshop 14 simulated data: genotype-phenotype relationships, gene interaction, linkage, association, disequilibrium, and ascertainment effects for a complex phenotype.
Embedded
yes

Text

We extensively tested the linkage-analysis-based detectability of the disease loci using microsatellite data and we aimed at calibrating the parameters to make data analysis appear realistic, based on our experience. This proved a difficult and time-consuming task. However, because the simulation model emphasized gene interaction rather than just detectability, the linkage signals were calibrated to yield evidence of linkage in a majority of data sets at all true loci.