dbGaP cohort
Evidence from:
primary |
all sources
Related entities (6)
| Subject | Relation | Object | p-value | Evidence |
|---|---|---|---|---|
| Collaborative Study on the Genetics of Alcoholism (COGA) | interacts_with | dbGaP | — | 1 |
| control population | associated_with | dbGaP | — | 1 |
| dbGaP | associated_with | Collaborative Study on the Genetics of Alcoholism (COGA) | — | 1 |
| dbGaP | interacts_with | SNP | — | 1 |
| dbGaP | associated_with | substance use | — | 1 |
| MVP | associated_with | dbGaP | — | 1 |
Mentioned in (28)
Papers in which this entity is mentioned.
- Genome-wide analyses identify 30 loci associated with obsessive-compulsive disorder. (2025)
- Mutations in the bone morphogenetic protein signaling pathway sensitize zebrafish and humans to ethanol-induced jaw malformations. (2025)
- The Collaborative Study on the Genetics of Alcoholism: Overview. (2023)
- Mapping clustered mutations in cancer reveals APOBEC3 mutagenesis of ecDNA. (2022)
- Variant interpretation using population databases: Lessons from gnomAD. (2022)
- Feasibility of whole genome and transcriptome profiling in pediatric and young adult cancers. (2022)
- The Data Use Ontology to streamline responsible access to human biomedical datasets. (2021)
- Integrating predicted transcriptome from multiple tissues improves association detection. (2019)
- Rapid and reversible suppression of ALT by DAXX in osteosarcoma cells. (2019)
- Integrating predicted transcriptome from multiple tissues improves association detection. (2019)
- VCF2CNA: A tool for efficiently detecting copy-number alterations in VCF genotype data and tumor purity. (2019)
- Attention and corpus callosum volumes in individuals with mucopolysaccharidosis type I. (2019)
- Comprehensive analysis of structural variants in breast cancer genomes using single molecule sequencing (2019)
- Pan-cancer genome and transcriptome analyses of 1,699 paediatric leukaemias and solid tumours. (2018)
- Genome-wide somatic variant calling using localized colored de Bruijn graphs. (2018)
- An open access pilot freely sharing cancer genomic data from participants in Texas. (2016)
- KAT2B polymorphism identified for drug abuse in African Americans with regulatory links to drug abuse pathways in human prefrontal cortex. (2016)
- A gene-based association method for mapping traits using reference transcriptome data. (2015)
- Rise and fall of subclones from diagnosis to relapse in pediatric B-acute lymphoblastic leukaemia. (2015)
- Unraveling the clonal hierarchy of somatic genomic aberrations. (2014)
- Whole-exome sequencing and clinical interpretation of formalin-fixed, paraffin-embedded tumor samples to guide precision cancer medicine. (2014)
- Sensitive detection of somatic point mutations in impure and heterogeneous cancer samples. (2013)
- An APOBEC cytidine deaminase mutagenesis pattern is widespread in human cancers. (2013)
- The Genotype-Tissue Expression (GTEx) project. (2013)
- Novel mutations target distinct subgroups of medulloblastoma. (2012)
- Genome-wide association study of theta band event-related oscillations identifies serotonin receptor gene HTR7 influencing risk of alcohol dependence. (2011)
- Genomic regions identified by overlapping clusters of nominally-positive SNPs from genome-wide studies of alcohol and illegal substance dependence. (2011)
- Recurring mutations found by sequencing an acute myeloid leukemia genome. (2009)
Merged raw entities (6)
All extracted name/type variants the normalize job merged into this entity. Use this to spot wrong merges, or aliases that should be split off.
| Raw name | Type | Papers | Mentions |
|---|---|---|---|
| dbgap | cohort | 38 | 57 |
| dbgap | drug | 9 | 9 |
| database of genotypes and phenotypes | cohort | 2 | 2 |
| dbgap repository | cohort | — | — |
| ncbi database of genotypes and phenotypes | cohort | — | — |
| phs000417.v2.p1 | cohort | — | — |