Genome-wide analyses identify 30 loci associated with obsessive-compulsive disorder.
- Authors
- Strom, Nora I; Gerring, Zachary F; Galimberti, Marco; Yu, Dongmei; Halvorsen, Matthew W; Abdellaoui, Abdel; Rodriguez-Fontenla, Cristina; Sealock, Julia M; Bigdeli, Tim; Coleman, Jonathan R; Mahjani, Behrang; Thorp, Jackson G; Bey, Katharina; Burton, Christie L; Luykx, Jurjen J; Zai, Gwyneth; Alemany, Silvia; Andre, Christine; Askland, Kathleen D; BΓ€ckmann, Julia; Banaj, Nerisa; Barlassina, Cristina; Nissen, Judith Becker; Bienvenu, O Joseph; Black, Donald; Bloch, Michael H; BΓΈrte, Sigrid; Bosch, Rosa; Breen, Michael; Brennan, Brian P; Brentani, Helena; Buxbaum, Joseph D; Bybjerg-Grauholm, Jonas; Byrne, Enda M; Cabana-Dominguez, Judit; Camarena, Beatriz; Camarena, Adrian; Cappi, Carolina; Carracedo, Angel; Casas, Miguel; Cavallini, Maria Cristina; Ciullo, Valentina; Cook, Edwin H; Crosby, Jesse; Cullen, Bernadette A; De Schipper, Elles J; Delorme, Richard; Djurovic, Srdjan; Elias, Jason A; Estivill, Xavier; Falkenstein, Martha J; Fundin, Bengt T; Garner, Lauryn; Gironda, Christina; Goes, Fernando S; Grados, Marco A; Grove, Jakob; Guo, Wei; Haavik, Jan; Hagen, Kristen; Harrington, Kelly; Havdahl, Alexandra; HΓΆffler, Kira D; Hounie, Ana G; Hucks, Donald; Hultman, Christina; Janecka, Magdalena; Jenike, Eric; Karlsson, Elinor K; Kelley, Kara; Klawohn, Julia; Krasnow, Janice E; Krebs, Kristi; Lange, Christoph; Lanzagorta, Nuria; Levey, Daniel; Lindblad-Toh, Kerstin; Macciardi, Fabio; Maher, Brion; Mathes, Brittany; McArthur, Evonne; McGregor, Nathaniel; McLaughlin, Nicole C; Meier, Sandra; Miguel, Euripedes C; Mulhern, Maureen; Nestadt, Paul S; Nurmi, Erika L; O'Connell, Kevin S; Osiecki, Lisa; Ousdal, Olga Therese; Palviainen, Teemu; Pedersen, Nancy L; Piras, Fabrizio; Piras, Federica; Potluri, Sriramya; Rabionet, Raquel; Ramirez, Alfredo; Rauch, Scott; Reichenberg, Abraham; Riddle, Mark A; Ripke, Stephan; RosΓ‘rio, Maria C; Sampaio, Aline S; Schiele, Miriam A; Skogholt, Anne Heidi; Sloofman, Laura G; Smit, Jan; Soler Artigas, MarΓa; Thomas, Laurent F; Tifft, Eric; Vallada, Homero; van Kirk, Nathanial; Veenstra-VanderWeele, Jeremy; Vulink, Nienke N; Walker, Christopher P; Wang, Ying; Wendland, Jens R; Winsvold, Bendik S; Yao, Yin; Zhou, Hang; Estonian Biobank; 23andMe Inc.; Agrawal, Arpana; Alonso, Pino; Berberich, GΓΆtz; Bucholz, Kathleen K; Bulik, Cynthia M; Cath, Danielle; Denys, Damiaan; Eapen, Valsamma; Edenberg, Howard; Falkai, Peter; Fernandez, Thomas V; Fyer, Abby J; Gaziano, J M; Geller, Dan A; Grabe, Hans J; Greenberg, Benjamin D; Hanna, Gregory L; Hickie, Ian B; Hougaard, David M; Kathmann, Norbert; Kennedy, James; Lai, Dongbing; LandΓ©n, Mikael; Le Hellard, StΓ©phanie; Leboyer, Marion; Lochner, Christine; McCracken, James T; Medland, Sarah E; Mortensen, Preben B; Neale, Benjamin M; Nicolini, Humberto; Nordentoft, Merete; Pato, Michele; Pato, Carlos; Pauls, David L; Piacentini, John; Pittenger, Christopher; Posthuma, Danielle; Ramos-Quiroga, Josep Antoni; Rasmussen, Steven A; Richter, Margaret A; Rosenberg, David R; Ruhrmann, Stephan; Samuels, Jack F; Sandin, Sven; Sandor, Paul; Spalletta, Gianfranco; Stein, Dan J; Stewart, S Evelyn; Storch, Eric A; Stranger, Barbara E; Turiel, Maurizio; Werge, Thomas; Andreassen, Ole A; BΓΈrglum, Anders D; Walitza, Susanne; Hveem, Kristian; Hansen, Bjarne K; RΓΌck, Christian; Martin, Nicholas G; Milani, Lili; Mors, Ole; Reichborn-Kjennerud, Ted; RibasΓ©s, Marta; Kvale, Gerd; Mataix-Cols, David; Domschke, Katharina; GrΓΌnblatt, Edna; Wagner, Michael; Zwart, John-Anker; Breen, Gerome; Nestadt, Gerald; Kaprio, Jaakko; Arnold, Paul D; Grice, Dorothy E; Knowles, James A; Ask, Helga; Verweij, Karin J; Davis, Lea K; Smit, Dirk J; Crowley, James J; Scharf, Jeremiah M; Stein, Murray B; Gelernter, Joel; Mathews, Carol A; Derks, Eske M; Mattheisen, Manuel
- Year
- 2025
- Journal
- medRxiv : the preprint server for health sciences
- PMID
- 38712091
- DOI
- 10.1101/2024.03.13.24304161
- PMCID
- PMC11071577
- Published as
- Genome-wide analyses identify 30 loci associated with obsessive-compulsive disorder. β
Obsessive-compulsive disorder (OCD) affects ~1% of children and adults and is partly caused by genetic factors. We conducted a genome-wide association study (GWAS) meta-analysis combining 53,660 OCD cases and 2,044,417 controls and identified 30 independent genome-wide significant loci. Gene-based approaches identified 249 potential effector genes for OCD, with 25 of these classified as the most likely causal candidates, including , , and multiple genes in the MHC region. We estimated that ~11,500 genetic variants explained 90% of OCD genetic heritability. OCD genetic risk was associated with excitatory neurons in the hippocampus and cortex, along with D1- and D2-type dopamine receptor-containing medium spiny neurons. OCD genetic risk was shared with 65 of 112 additional phenotypes, including all of the psychiatric disorders we examined. In particular, OCD shared genetic risk with anxiety, depression, anorexia nervosa, and Tourette syndrome, and was negatively associated with inflammatory bowel diseases, educational attainment, and body mass index.
Manhattan plot of OCD GWAS meta-analysis.The y-axis represents βlog10 P-values (two-sided, not adjusted for multiple testing) for the association of variants with OCD using an inverse-variance weighted fixed effects model (ncases = 53,660 and ncontrols = 2,044,417). The x-axis shows chromosomes 1 to 22. The horizontal red line represents the threshold for genome-wide significance (P = 5 Γ 10β8). Index variants of genome-wide significant loci are highlighted as a green diamond.
Gene-based, tissue, and cell type enrichment analyses.a, List of 25 genes that were implicated in at least two of the five different gene-based tests (significance indicated by grey dots) and passed the TWAS colocalization and/or SMR-HEIDI filters (significance indicated by orange dots). Conditionally independent genes within each locus are indicated by blue dots. b, Enrichment of OCD GWAS signal in human brain-related tissues from GTEx (v8). No significant enrichment was observed in the peripheral tissues (not included in the figure). The horizontal bar size represents the significance of the enrichment measured using the MAGMA gene set enrichment test or partitioned LDSC. c, Top 20 groups of brain cell types (n = 35 total tested) enriched with OCD GWAS signal using MAGMA. Dots represent βlog10 P-values from MAGMA gene set enrichment tests of individual neuronal cell types from Zeisel et al.30. Vertical crosses represent the mean βlog10 P-value observed for each brain cell type group. Blue crosses represent a significant enrichment of OCD GWAS signals (false discovery rate across 35 groups, FDR < 0.05), while pink crosses indicate non-significant enrichment. Grey points represent the association (βlog10 P-value) for each single cell cluster (βlevel 5β analysis defined by Zeisel et al.30) in a given cell type (e.g., excitatory neurons, cerebral cortex).
Genetic correlations (rG) between OCD and 112 phenotypes.This includes psychiatric, substance use, cognition/socioeconomic status (SES), personality, psychological, neurological, autoimmune, cardiovascular, anthropomorphic/diet, fertility, and other phenotypes. References and sample sizes of the corresponding summary statistics of the GWAS studies can be found in Supplementary Table 18. The OCD summary statistics are of the main meta-analysis (ncases = 53,660 and ncontrols = 2,044,417). Error bars represent the 95% confidence intervals for the genetic correlation estimates (rG). Red circles indicate significant associations with a P-value adjusted for multiple testing with the Benjamini-Hochberg procedure to control the FDR (< 0.05). Black circles indicate associations that are not significant.
| Name | Type |
|---|---|
| 1000 Genomes Phase 3 European sample local | cohort |
| 1000 Genomes Project | cohort |
| 112 other disorders and traits local | phenotype |
| 23andMe | cohort |
| 23andMe discovery data set local | cohort |
| 23andMe, Inc. | cohort |
| 23andMe participants local | cohort |
| 23andMe subgroup local | cohort |
| Additional cohorts (~9,000 cases) local | cohort |
| ADHD | phenotype |
| AGDS | cohort |
| alcohol dependence | phenotype |
| anorexia nervosa | phenotype |
| anterior cingulate cortex | anatomy |
| anxiety | phenotype |
| ascertainment-specific sub-cohort local | cohort |
| Ascertainment-specific subgroups local | cohort |
| A/T SNP local | variant |
| autoimmune diseases | phenotype |
| autoimmune processes local | phenotype |
| Banner Sun Health Research Institute local | cohort |
| basal ganglia | anatomy |
| biobanks | cohort |
| biobank subgroup local | cohort |
| BioVU | cohort |
| bipolar disorder | phenotype |
| body fat mass local | phenotype |
| body mass index | phenotype |
| brain | anatomy |
| causaldb local | cohort |
| causal variants | cohort |
| CELSR3 | gene |
| cerebellum | anatomy |
| C/G SNP local | variant |
| Chop local | cohort |
| clinical cohort | cohort |
| clinical collections local | cohort |
| clinically-ascertained subgroup local | cohort |
| clinical-OCD subgroup local | cohort |
| CLP1 local | gene |
| Collaborative Study on the Genetics of Alcoholism (COGA) | cohort |
| combined meta-analysis (excluding 23andMe) local | cohort |
| common factor | phenotype |
| common variants | cohort |
| comorbid local | cohort |
| comorbid subgroup local | cohort |
| compulsivity | phenotype |
| Compulsivity/Impulsivity local | phenotype |
| Contributing cohorts local | cohort |
| copy number variations | variant |
| cortex | anatomy |
| Crohnβs disease | phenotype |
| CTNND1 | gene |
| DALRD3 | gene |
| dbGaP | cohort |
| de novo variant | variant |
| depression | phenotype |
| depression/major depressive disorder local | phenotype |
| Depressive sub-cluster local | phenotype |
| depressive symptoms | phenotype |
| developmental delay | phenotype |
| different cohorts local | cohort |
| Dlgap1 | gene |
| dlPFC | anatomy |
| dorsolateral prefrontal cortex | anatomy |
| DRD1 | gene |
| DRD2 | gene |
| drugs | drug |
| DSM-IV | phenotype |
| educational attainment | phenotype |
| EGOS | cohort |
| electronic registries local | cohort |
| epileptic encephalopathy local | phenotype |
| EPOC local | cohort |
| eQTLGen Consortium | cohort |
| EstBB local | cohort |
| European-ancestry OCD case-control cohorts local | cohort |
| European population | cohort |
| Europeans | cohort |
| European subsample local | cohort |
| Excitatory neuron local | cell_type |
| FinnGen | cohort |
| First OCD GWAS meta-analysis local | cohort |
| frontal cortex | anatomy |
| Future larger scale sequencing studies local | cohort |
| genome-wide significant loci | cohort |
| Globus pallidus externa local | anatomy |
| Globus pallidus interna local | anatomy |
| GTEx | cohort |
| GWAS | cohort |
| GWAS84 local | cohort |
| gwasATLAS local | cohort |
| GWASβprioritized genes local | gene |
| Halvorsen et al.88 local | cohort |
| Haplotype Reference Consortium (HRC) local | cohort |
| HapMap | cohort |
| height | phenotype |
| hippocampus | anatomy |
| HRC reference local | cohort |
| human brain protein expression panels local | cohort |
| HUNT | cohort |
| hypothalamus | anatomy |
| ICD-10 | phenotype |
| IEU open GWAS project local | cohort |
| impulsivity | phenotype |
| inflammatory bowel disease | phenotype |
| intelligence | phenotype |
| IOCDF local | cohort |
| IOCDF_trio local | cohort |
| iPSYCH | cohort |
| LDSC | drug |
| LD score regression | drug |
| lead SNP | cohort |
| Loci 1-15 (second GWAS) local | variant |
| Locus 1 (first GWAS) local | variant |
| loss of function intolerant genes local | gene |
| loss of function variant local | variant |
| loss of function variants local | variant |
| lung acinar adenocarcinoma local | phenotype |
| lung papillary adenocarcinoma local | phenotype |
| MAGMA | drug |
| major depressive disorder | phenotype |
| Medium spiny neuron local | cell_type |
| MetaBrain local | cohort |
| MHC complex local | gene |
| MHC locus | gene |
| Michigan/Toronto IGS local | cohort |
| migraine | phenotype |
| missense variants | variant |
| MiXeR | drug |
| MoBa local | cohort |
| mouse central nervous system local | anatomy |
| mouse peripheral nervous system local | anatomy |
| MVP | cohort |
| neurodevelopmental disorder with microcephaly, cortical malformations, spasticity, congenital nervous system abnormalities local | phenotype |
| neuroticism | phenotype |
| NHGRI-EBI GWAS catalog | cohort |
| NORDiC-nor local | cohort |
| NORDiC-swe local | cohort |
| obsessive-compulsive disorder | phenotype |
| OCD | phenotype |
| OCD-associated loci local | variant |
| OCD GWAS genes local | gene |
| OCD_JHU_quartets local | cohort |
| OCD-related phenotypes local | phenotype |
| OCD risk genes | gene |
| OCGAS | cohort |
| OCGAS-ab local | cohort |
| OCGAS-gh local | cohort |
| OCGAS-nes local | cohort |
| Overall mortality local | phenotype |
| PANDAS local | phenotype |
| PANS local | phenotype |
| Parkinsonβs disease | phenotype |
| participating cohort local | cohort |
| phenotype | phenotype |
| phs001672.v12.p1 local | cohort |
| physical abuse | phenotype |
| pontocerebellar hypoplasia type 10 local | phenotype |
| Post-Traumatic Stress Disorder | phenotype |
| prefrontal cortex | anatomy |
| Previously published OCD GWASs local | cohort |
| Psych_Broad local | cohort |
| PsychENCODE | cohort |
| psychiatric disorders | phenotype |
| Psychiatric Genomics Consortium | cohort |
| QIMR Berghofer Medical Research Institute genetic epidemiology cohort local | cohort |
| Rare de novo coding variants local | variant |
| rare variant | cohort |
| rare variant testing local | cohort |
| Religious Orders Study and Rush Memory and Aging Project local | cohort |
| risk-taking behavior | phenotype |
| rs78587207 local | variant |
| rumination | phenotype |
| Rumination/Worry/Neuroticism local | phenotype |
| schizophrenia | phenotype |
| Second OCD GWAS meta-analysis local | cohort |
| SNP | cohort |
| SNP-based heritability | phenotype |
| spinal cord | anatomy |
| striatum | anatomy |
| subgroup local | phenotype |
| subjective well-being | phenotype |
| substance use | phenotype |
| substantia nigra | anatomy |
| suicide | phenotype |
| synonymous variant | variant |
| Tiredness | phenotype |
| TMX2 | gene |
| Tourette syndrome | phenotype |
| Two unpublished OCD GWASs local | cohort |
| UKBB | cohort |
| UK Biobank | cohort |
| ulcerative colitis | phenotype |
| WDR6 | gene |
| worry | phenotype |
| Worry subcluster local | phenotype |
| WWF local | cohort |
| X chromosome | drug |
| YalePenn | cohort |
| ZDHHC5 | gene |
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External
| Title | Authors | Journal | Year | Link |
|---|---|---|---|---|
| Multigenerational family coaggregation study of obsessive-compulsive disorder and cardiometabolic disorders. | Holmberg A et al. | β | 2025 | β |
| Rare coding mutations identify 36 large-effect risk genes in obsessive-compulsive disorder and chronic tic disorders | Wang B et al. | β | 2025 | β |