Description of the data from the Collaborative Study on the Genetics of Alcoholism (COGA) and single-nucleotide polymorphism genotyping for Genetic Analysis Workshop 14.
paper
Primary
Public
- Authors
- Edenberg, Howard J; Bierut, Laura J; Boyce, Paul; Cao, Manqiu; Cawley, Simon; Chiles, Richard; Doheny, Kimberly F; Hansen, Mark; Hinrichs, Tony; Jones, Kevin; Kelleher, Mark; Kennedy, Giulia C; Liu, Guoying; Marcus, Gregory; McBride, Celeste; Murray, Sarah Shaw; Oliphant, Arnold; Pettengill, James; Porjesz, Bernice; Pugh, Elizabeth W; Rice, John P; Rubano, Todd; Shannon, Stu; Steeke, Rhoberta; Tischfield, Jay A; Tsai, Ya Yu; Zhang, Chun; Begleiter, Henri
- Year
- 2005
- Journal
- BMC genetics
- PMID
- 16451628
- DOI
- 10.1186/1471-2156-6-S1-S2
- PMCID
- PMC1866767
The data provided to the Genetic Analysis Workshop 14 (GAW 14) was the result of a collaboration among several different groups, catalyzed by Elizabeth Pugh from The Center for Inherited Disease Research (CIDR) and the organizers of GAW 14, Jean MacCluer and Laura Almasy. The DNA, phenotypic characterization, and microsatellite genomic survey were provided by the Collaborative Study on the Genetics of Alcoholism (COGA), a nine-site national collaboration funded by the National Institute of Alcohol and Alcoholism (NIAAA) and the National Institute of Drug Abuse (NIDA) with the overarching goal of identifying and characterizing genes that affect the susceptibility to develop alcohol dependence and related phenotypes. CIDR, Affymetrix, and Illumina provided single-nucleotide polymorphism genotyping of a large subset of the COGA subjects. This article briefly describes the dataset that was provided.
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| # | Section | Preview |
|---|---|---|
| 40 | Abbreviations | ERP: Event-related potentional |
| 41 | Abbreviations | ERO: Event-related oscillation |
| 42 | Abbreviations | GAW: Genetic Analysis Workshop |
| 43 | Abbreviations | IRB: Institutional Review Boards |
| 44 | Abbreviations | LIMS: Laboratory Information Management System |
| 45 | Abbreviations | LSO: Locus-specific oligonucleotide |
| 46 | Abbreviations | NIAAA: National Institute of Alcohol and Alcoholism |
| 47 | Abbreviations | NIDA: National Institute of Drug Abuse |
| 48 | Abbreviations | SNP: Single-nucleotide polymorphism |
| 49 | Abbreviations | SSAGA: Semi-Structured Assessment for the Genetics of Alcoholism |
| 50 | Abbreviations | STR: Short tandem repeat |
| 51 | Authors' contributions | COGA authors (HJE, LJB, TH, KJ, BP, JPR, JAT, HB) were responsible for the ascertainment,… |
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